Return to main results Retrieve Phyre Job Id

Job DescriptionP06965
Confidence87.74%DateWed Jan 25 15:20:12 GMT 2012
Rank67Aligned Residues37
% Identity22%Templatec2ewtA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of the dna-binding domain of bldd
Resolution1.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20. ........30 ...... ...40........
Predicted Secondary structure 

..


.





.
Query SS confidence 









. .








.





.











Query Sequence  SKTKLAQAAG. . IRLASLYSW. KGDLVP. EGRAMRLQEASG
Query Conservation      

  

..

  

 

.

  

.  


 

  
 
Alig confidence 









..








.





.











Template Conservation 

  

   
  

   

  
 
   

   
  

  
 
Template Sequence  SLHGVEEKSQGRWKAVVVGSYERGDRAVTVQRLAELADFYG
Template Known Secondary structure 
TTTSS
T
S


T
Template Predicted Secondary structure 









Template SS confidence 








































   23......30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions