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Job DescriptionP06965
Confidence24.50%DateWed Jan 25 15:20:12 GMT 2012
Rank261Aligned Residues18
% Identity11%Templatec1zreB_
PDB info PDB header:gene regulation/dnaChain: B: PDB Molecule:catabolite gene activator; PDBTitle: 4 crystal structures of cap-dna with all base-pair2 substitutions at position 6, cap-[6g;17c]icap38 dna
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........
Predicted Secondary structure 



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Query Sequence  SKTKLAQAAGIRLASLYS
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Template Sequence  TRQEIGQIVGCSRETVGR
Template Known Secondary structure 
TS
Template Predicted Secondary structure 



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   168.170.........180.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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