Job Description P0A9J4 Confidence 97.90% Date Thu Jan 5 11:10:27 GMT 2012
Rank 256 Aligned Residues 108
% Identity 13% Template c3pgjB_
PDB info
PDB header: oxidoreductaseChain: B: PDB Molecule: shikimate dehydrogenase;
PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate
Resolution 2.49 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . .
. . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
K I T V L G C G A L G Q L W L T A L C K Q G H .
E V Q G W L R V P Q P Y C S V N L V E T D G S I F N E S L T A N D P D F L A T S D L L L V T L K A W Q V S D A V
Query Conservation  
                        .                                                                                              
Alig confidence  
. . . .
Template Conservation  
                                                  . . .                                              
Template Sequence  
T I L L I G A G G A A R G V L K P L L D Q Q P A S I T V T N R T F A K A E Q L A E L V A A .
.
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Y G E V K A Q A F E Q L K Q S Y D V I I N S T S A S L D G E L P
Template Known Secondary structure  
S T T T S S S T . . . T S G G G S S S S T T T T T
Template Predicted Secondary structure  
. . .
Template SS confidence  
   
125 . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . .
170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 .
 
   
81 . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
K S L A S T L P V T T P I L L I H N G M G T I E E L Q N I Q Q P
Query Conservation  
                                                       
Alig confidence  
Template Conservation  
                                             
Template Sequence  
A I D P V I F S S R S V C Y D M M Y G K G Y T V F N Q W A R Q H
Template Known Secondary structure  
G G G T T S S S T
Template Predicted Secondary structure  
Template SS confidence  
   
202 . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]