Job Description P0A9J4 Confidence 99.85% Date Thu Jan 5 11:10:27 GMT 2012 Rank 40 Aligned Residues 266 % Identity 13% Template c3pduF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:3-hydroxyisobutyrate dehydrogenase family protein; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter sulfurreducens in complex with nadp+ Resolution 1.89 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	K	A	W	Q	V	S	D	A	V	K
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		T	Y	G	F	L	G	L	G	I	M	G	G	P	M	A	A	N	L	V	R	A	G	F	D	V	T	V	W	N	R	N	P	A	K	C	A	P	L	V	A	L	.	.	.	.	.	.	.	G	A	R	Q	A	S	S	P	A	E	V	C	A	A	C	D	I	T	I	A	M	L	A	D	P	A	A	A	R	E	V	C
Template Known Secondary structure									S	T	T											T	T								S	S	G	G	G	G							.	.	.	.	.	.	.	T					S	S									S							S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		82	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		S	L	A	S	T	L	.	.	.	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T
Query Conservation								.	.	.
Alig confidence								.	.	.																																																						.	.
Template Conservation																																																																.	.
Template Sequence		F	G	A	N	G	V	L	E	G	I	G	G	G	R	G	Y	I	D	M	S	T	V	D	D	E	T	S	T	A	I	G	A	A	V	T	A	R	G	G	R	F	L	E	A	P	V	S	G	T	K	K	P	A	E	D	G	T	L	I	I	L	A	.	.	A	G	D	Q	S	L	F	T	D	A	G	P	A	F	A	A
Template Known Secondary structure			S	T	T								T	T							S																	T	T																		T							.	.										T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E	D	L	R	D	Y	V	M	Q	V	I	D	A	T
Query Conservation
Alig confidence																																									.																	.	.
Template Conservation																																									.																	.	.
Template Sequence		L	G	K	K	C	L	H	L	G	E	V	G	Q	G	A	R	M	K	L	V	V	N	M	I	M	G	Q	M	M	T	A	L	G	E	G	M	A	L	G	.	R	N	C	G	L	D	G	G	Q	L	L	E	V	L	D	A	.	.	G	A	M	A	N	P	M	F	K	G	K	G	Q	M	L	L	S	G	E	F	P	T
Template Known Secondary structure										S	S	T	T																												.			T	T													.	.	S	T	T															T
Template Predicted Secondary structure																																									.																	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V	K	R	K	E	S	E
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	P	L	K	H	M	Q	K	D	L	R	L	.	.	.	.	.	.	.	.	.	.	.	.	A	V	E	L	G	D	R	L	G	Q	P	L	H	G	A	A	T	A	N	E	S	F	K	R	A	R	A	A
Template Known Secondary structure		S	S	B											.	.	.	.	.	.	.	.	.	.	.	.									T																			T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.													.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions