Job Description P0A9J4 Confidence 99.73% Date Thu Jan 5 11:10:27 GMT 2012 Rank 54 Aligned Residues 257 % Identity 14% Template c3ojlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	.	.	.	.	.	.	.	.	.	D	F	L	A	T	S	D	L	L	L	V	T	L	K
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	T	V	V	G	L	G	Y	I	G	L	P	T	S	I	M	F	A	K	H	G	V	D	V	L	G	V	D	I	N	Q	Q	T	I	D	K	L	Q	N	G	Q	I	S	I	E	E	P	G	L	Q	E	V	Y	E	E	V	L	S	S	G	K	L	K	V	S	T	T	P	E	A	S	D	V	F	I	I	A	V	P
Template Known Secondary structure									S	T	T											T	T								S										T	T			S	S			T	T											T	T	S					S	S					S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		73	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.										.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Query Sequence		A	W	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	.	.	.	.	.	.	.	.	.	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																					.																						.	.	.	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		T	P	N	N	D	D	Q	Y	R	S	C	D	I	S	L	V	M	R	A	L	D	S	I	L	P	F	L	K	K	G	N	T	I	I	.	V	E	S	T	I	A	P	K	T	M	D	D	F	V	K	P	V	I	E	N	L	G	F	T	I	G	E	D	I	Y	L	V	H	C	P	E	R	V	L	P	G	K	I	L	E
Template Known Secondary structure				B		S	S	T	T			B													G	G	G			T	T					.			S				T	T					T							T	T	T			B	T	T	T	B											S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V
Query Conservation
Alig confidence										.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	V	H	N	N	R	I	.	I	G	G	V	T	K	A	C	I	E	A	G	K	R	V	Y	R	T	F	V	Q	G	E	M	I	E	T	D	A	R	T	A	E	M	S	K	L	M	E	N	T	Y	R	D	V	N	I	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	E	L
Template Known Secondary structure						S				.				S	S												T	T	T			S																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																			.	.	220	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		A	A	V	I	E	R	E	G	H	H	T	S	A	E	D	L	R	D	Y	V	M	Q	.	.	.	.	.	.	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V
Query Conservation																								.	.	.	.	.	.
Alig confidence										.	.													.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	I	C	N	N	L	N	.	.	I	N	V	L	D	V	I	E	M	A	N	K	H	P	R	V	N	I	H	Q	P	G	P	G	V	G	G	H	C	L	A	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	F	I	I	A	K	D	P	E	N	A	K	L	I	Q	T	G	R	E	I	N
Template Known Secondary structure								T	T	.	.											T	T	S	T	T								S										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S	T	T	T
Template Predicted Secondary structure										.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		286	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	E	S	E	Y	E	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	M	P	A	Y	V	V	D	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions