 |
Job Description | P0A9J4 | Confidence | 97.22% | Date | Thu Jan 5 11:10:27 GMT 2012 |
Rank | 412 | Aligned Residues | 83 |
% Identity | 19% | Template | c3kydB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:sumo-activating enzyme subunit 2; |
PDBTitle: human sumo e1~sumo1-amp tetrahedral intermediate mimic
|
Resolution | 2.61 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
M | K | I | T | V | L | G | C | G | A | L | G | Q | L | W | L | T | A | L | C | K | Q | G | . |
H | E | V | Q | G | W | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | V | P | Q | P | Y | C | S | V | N | L | V | E | T | D | G | S | I | F | N | E | S | L | T | A | N | D | . |
Query Conservation |   |
|
|
|   |
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
| . |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|
|   |
|   |
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
G | R | V | L | V | V | G | A | G | G | I | G | C | E | L | L | K | N | L | V | L | T | G | F | S | H | I | D | L | I | D | L | D | T | I | D | V | S | N | L | N | R | Q | F | L | F | Q | K | K | H | V | G | R | S | K | A | Q | V | A | K | E | S | V | L | Q | F | Y | P | K | A | N | I | V | A | Y | H | D | S | I | M |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|
| B |
|
|
| B | T | T | B |
|
| S | S |
|
| G | G | G | T | T | S | B |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  |
| S |
| T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
P | D | F | L | A | T | S | D | L | L | L | V | T | L | K | A | W | Q | V | S | D | A | V | K | S | L |
Query Conservation |   |
. | . | . | . | . |   |
|   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
N | P | D | Y | N | V | E | F | F | R | Q | F | I | L | V | M | N | A | L | D | N | R | A | A | R | N | H | V | N | R | M |
Template Known Secondary structure |   |
S | T | T | S |
|  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|