Job Description P0A9J4 Confidence 99.87% Date Thu Jan 5 11:10:27 GMT 2012 Rank 37 Aligned Residues 256 % Identity 17% Template c3gg2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.														.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	I	A	V	V	G	I	G	Y	V	G	L	V	S	A	T	C	F	A	E	L	G	A	N	V	R	C	I	D	T	D	R	N	K	I	E	Q	L	N	S	G	T	I	P	I	Y	E	P	G	L	E	K	M	I	A	R	N	V	K	A	G	R	L	R	F	G	T	E	I	E	Q	A	V	P	E	A	D	I	I
Template Known Secondary structure										S													T	T								S										T	T			S	S			T	T											T	T	S					S						G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		68	.	70	.	.	.											.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Query Sequence		L	V	T	L	K	A	.	.	.	.	.	.	.	.	.	.	W	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	.	.	.	.	.	.	.	.	.	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V
Query Conservation								.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	A	V	G	T	P	A	G	E	D	G	S	A	D	M	S	Y	V	L	D	A	A	R	S	I	G	R	A	M	S	R	Y	I	L	I	V	T	K	S	T	V	P	V	G	S	Y	R	L	I	R	K	A	I	Q	E	E	L	D	K	R	E	V	L	I	D	F	D	I	A	S	N	P	E	F	L	K	E	G	N
Template Known Secondary structure									B		T	T	S	S	B																		S								S				T	T																T	T																T	T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C
Query Conservation
Alig confidence																																			.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	D	D	F	M	K	P	D	R	V	V	V	G	V	D	S	D	R	A	R	E	L	I	T	S	L	Y	K	P	M	L	R	.	.	V	L	F	M	D	I	A	S	A	E	M	T	K	Y	A	A	N	A	M	L	A	T	R	I	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M
Template Known Secondary structure								S		S							S	S												T	T	T			.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.																			.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.							.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E	D	L	R	D	Y	V	.	.	.	.	.	.	M	Q	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	V	A	N	L	C	E	R	V	G	A	D	V	S	M	V	R	L	G	I	G	S	D	S	R	I	G	S	K	F	L	Y	P	G	C	G	Y	G	G	S	C	F	P	K	D	V	K	A	.	.	.	.	.	.	.	.	.	.	.	.	L	I	R	T	A	E	D	N	G	Y	R	M	E	V	L	E	A	V	E
Template Known Secondary structure												T												T	S	T	T	T		S	S	S				S	S				S	S	S								.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.													.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		283	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	V	K	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	N	E	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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