Job Description P0A9J4 Confidence 98.04% Date Thu Jan 5 11:10:27 GMT 2012 Rank 214 Aligned Residues 106 % Identity 19% Template c3dl2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	.	.	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	K	A	W	Q	V	S	D
Query Conservation																										.	.
Alig confidence																										.	.									.	.
Template Conservation																																				.	.
Template Sequence		N	K	I	T	V	V	G	G	G	E	L	G	I	A	C	T	L	A	I	S	A	K	G	I	A	D	R	L	V	L	L	D	L	S	.	.	E	G	T	K	G	A	T	M	D	L	E	I	F	N	L	P	N	V	E	I	S	K	D	L	S	A	S	A	H	S	K	V	V	I	F	T	V	N	S	Q	S	Y	L	D
Template Known Secondary structure										S														T			S								S	.	.		G	G	G		T	T							T		T	T					S		G	G	G	G	T	T		S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		79	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	K	S	L	A	S	T	L	.	.	.	.	.	.	.	.	.	.	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	Q	S	N	V	D	M	F	R	A	L	V	P	A	L	G	H	Y	S	Q	H	S	V	L	L	V	A	S	Q	P	V	E	I	M	T	Y	V	T	W
Template Known Secondary structure												T	T								S	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions