Job Description P0A9J4 Confidence 99.89% Date Thu Jan 5 11:10:27 GMT 2012 Rank 31 Aligned Residues 250 % Identity 15% Template c3cumA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable 3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of a possible 3-hydroxyisobutyrate dehydrogenase2 from pseudomonas aeruginosa pao1 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	.	K	A	W	Q	V	S	D	A	V
Query Conservation																																																																								.
Alig confidence																																											.	.	.	.	.	.	.																							.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		Q	I	A	F	I	G	L	G	H	X	G	A	P	X	A	T	N	L	L	K	A	G	Y	L	L	N	V	F	D	L	V	Q	S	A	V	D	G	L	V	A	A	.	.	.	.	.	.	.	G	A	S	A	A	R	S	A	R	D	A	V	Q	G	A	D	V	V	I	S	X	L	P	A	S	Q	H	V	E	G	L	Y
Template Known Secondary structure									S	T	T											T	T								S	S										T	.	.	.	.	.	.	.	T					S	S						T	S		S							S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
					81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q
Query Conservation		.	.	.
Alig confidence		.	.	.																					.																																								.	.
Template Conservation																									.																																								.	.
Template Sequence		L	D	D	D	G	L	L	A	H	I	A	P	G	T	L	V	L	E	C	S	T	I	A	.	P	T	S	A	R	K	I	H	A	A	A	R	E	R	G	L	A	X	L	D	A	P	V	S	G	G	T	A	G	A	A	A	G	T	L	T	F	X	V	.	.	G	G	D	A	E	A	L	E	K	A	R	P	L	F	E
Template Known Secondary structure			S	T	T						S		T	T							S				.														T	T										S								T							.	.		S
Template Predicted Secondary structure																									.																																								.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E	D	L	R	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	X	G	R	N	I	F	H	A	G	P	D	G	A	G	Q	V	A	K	V	C	N	N	Q	L	L	A	V	L	X	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	E	A	X	A	L	G	V	A	N	G	L	E	A	K	V	L	A	E	I	X	R	R	S	S	G	G	N	W
Template Known Secondary structure												S	T	T																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T												T	S	T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
															229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	V	M	Q	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V	K	R	K	E	S	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	E	V	Y	N	P	W	P	G	V	X	E	N	A	P	A	S	R	D	Y	S	G	G	F	X	A	Q	L	X	A	K	D	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	E	A	A	Q	A	S	A	S	S	T	P	X	G	S	L	A	L	S	L	Y	R	L	L	L	K	Q
Template Known Secondary structure									S	T	T	S	S	T	T	S	G	G	G	G	T	T		S	S	S	B											.	.	.	.	.	.	.	.	.	.	.	.									T																			T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250													.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions