Job Description P0A9J4 Confidence 99.95% Date Thu Jan 5 11:10:27 GMT 2012 Rank 18 Aligned Residues 288 % Identity 14% Template c3c7cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine) Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																								.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	.	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	A	N	D	P	D	F	L	A	T
Query Conservation																								.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	V	C	V	C	G	G	G	N	G	A	H	T	L	S	G	L	A	A	S	R	D	G	V	E	V	R	V	L	T	L	F	A	D	E	A	E	R	W	T	K	A	L	G	A	D	E	L	T	V	I	V	N	E	K	D	G	T	Q	T	E	V	K	S	R	P	K	V	I	T	K	D	P	E	I	A	I	S	G
Template Known Secondary structure										S											T	T	S	T	T									S	T	T										T	T	S									T	T	S										S				S							T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.				.	130	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.										.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.										.	.	.
Query Sequence		S	D	L	L	L	V	T	L	K	A	W	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	.	.	.	.	.	.	.	H	A	A	R	R	D	G	N	V	.	.	.	I	I	H	V	A
Query Conservation																																																										.	.	.	.	.	.	.										.	.	.
Alig confidence																																																										.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		A	D	V	V	I	L	T	V	P	A	F	A	H	E	G	Y	F	Q	A	M	A	P	Y	V	Q	D	S	A	L	I	V	G	L	P	S	Q	A	G	F	E	F	Q	C	R	D	I	L	G	D	K	A	A	A	V	S	M	M	S	F	E	T	L	P	W	A	C	R	I	K	E	F	G	R	K	V	E	V	L	G	T
Template Known Secondary structure			S						S		G	G	G									T	T	T			T	T						T	T			S	S										G	G	G	G	G	T	S						S	S		S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	.	.	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	V	L	A	A	S	L	I	K	G	T	A	K	T	V	D	P	L	S	T	L	Q	M	L	H	G	A	E	P	V	F	R	L	A	K	H	F	L	E	M	L	I	M	S	Y	S	F	V	H	P	A	I	L	F	G	R	W	G	S	W	D	G	K	P	V	P	E	A	P	L	F	Y	Q	G	I	D	Q	A	T
Template Known Secondary structure			S										S	S			S												S	S	S						S								T	T		T	T											T	T			S			B	S	S			B	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																									.	.	250
Predicted Secondary structure																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E	.	.	.	.	.	.	D	L	R	D	Y	V	M	Q	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	R
Query Conservation																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	M	L	T	A	C	S	N	E	C	K	D	V	A	N	A	I	M	A	A	C	P	G	N	D	L	S	D	V	K	D	I	Y	Q	W	Y	L	E	Y	Y	H	E	D	I	Q	D	D	H	D	L	Y	H	A	I	T	T	N	K	S	Y	K	G	L	V	H	P	V	K	A	V	D	G	G	V	A	P	D	F	G
Template Known Secondary structure																							S	T	T				T	T												S	T	T	T	B	S			S	S							T	B	G	G	G	T	T		B							T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		251	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	L	R	H	T	E	.	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V	K	R	K
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		N	R	Y	L	T	E	D	I	P	M	G	M	I	V	F	K	G	V	A	I	A	A	G	V	A	I	P	S	N	D	K	L	I	M	W	A	Q	E	K
Template Known Secondary structure		S	T	T	T	T	T	T	T	T	T	T												T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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