Job Description P0A9J4 Confidence 99.88% Date Thu Jan 5 11:10:27 GMT 2012 Rank 35 Aligned Residues 255 % Identity 16% Template c2y0dB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: bcec mutation y10k Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.														.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	N	L	T	I	I	G	S	G	K	V	G	L	V	T	G	A	C	L	A	D	I	G	H	D	V	F	C	L	D	V	D	Q	A	K	I	D	I	L	N	N	G	G	V	P	I	H	E	P	G	L	K	E	V	I	A	R	N	R	S	A	G	R	L	R	F	S	T	D	I	E	A	A	V	A	H	G	D	V	Q
Template Known Secondary structure										S												T	T	T								S									T	T	T			S	S			T	T											T	T	S															S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		68	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure								.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Query Sequence		L	V	T	L	K	A	.	.	.	.	.	W	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	.	.	.	.	.	.	.	.	.	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A
Query Conservation								.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																						.																					.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		F	I	A	V	G	T	P	S	A	D	L	Q	Y	V	L	A	A	A	R	N	I	G	R	Y	M	T	G	F	K	V	I	V	.	D	K	S	T	V	P	V	G	T	A	E	R	V	R	A	A	V	A	E	E	L	A	K	R	G	G	Q	M	F	S	V	V	S	N	P	E	F	L	K	E	G	A	A	V	D	D	F
Template Known Secondary structure																												S						.			S				T	T															T	T	T															T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	.	.	.	.	.	.	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I
Query Conservation																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	P	D	R	I	V	I	G	C	D	D	D	V	P	G	E	R	A	R	E	L	M	K	K	L	Y	A	P	F	N	R	N	H	E	R	T	L	Y	M	D	V	R	S	A	E	F	T	K	Y	A	A	N	A	M	L	A	T	R	I	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S		S								S	S															G	G	G		S	S	S																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.									.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.
Query Sequence		C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E	D	L	R	D	Y	V	M	Q	V	I	.	.	.	.	.	.	.	.	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T
Query Conservation																														.	.	.	.	.	.	.	.
Alig confidence														.	.															.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	E	L	A	N	L	A	D	R	F	G	.	.	A	D	I	E	A	V	R	R	G	I	G	S	D	P	R	I	G	Y	H	F	L	Y	A	G	C	G	Y	G	G	S	C	F	P	K	D	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	L	I	R	T	A	D	E	H	G	Q	S	L	Q	I	L	K
Template Known Secondary structure													T	.	.												T	S	T	T	T		S	S	S				S	S				S	S	S								.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.													.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	F	E	M	V	K	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	S	S	V	N	A	T	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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