Job Description P0A9J4 Confidence 100.00% Date Thu Jan 5 11:10:27 GMT 2012 Rank 9 Aligned Residues 265 % Identity 21% Template c2qytA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: crystal structure of 2-dehydropantoate 2-reductase from porphyromonas2 gingivalis w83 Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	.	.	.	.	.	.	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	.	.	.	.	.	.	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L
Query Conservation																									.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	I	A	V	F	G	L	G	G	V	G	G	Y	Y	G	A	X	L	A	L	R	A	A	A	T	D	G	L	L	E	V	S	W	I	A	R	G	A	H	L	E	A	I	R	A	A	G	G	L	R	V	V	T	P	S	R	D	F	L	A	R	P	T	C	V	T	D	N	P	A	E	V	G	T	V	D	Y	I	L
Template Known Secondary structure										S																	T	T	S	S																			T	S						S	S								S				S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																											.	.														.																						.	.
Query SS confidence																																											.	.														.																						.	.
Query Sequence		V	T	L	K	A	W	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	.	.	Q	Q	P	L	L	M	G	T	T	T	H	A	A	.	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	.	.
Query Conservation																																											.	.														.																						.	.
Alig confidence																																											.	.														.																						.	.
Template Conservation
Template Sequence		F	C	T	K	D	Y	D	X	E	R	G	V	A	E	I	R	P	X	I	G	Q	N	T	K	I	L	P	L	L	N	G	A	D	I	A	E	R	X	R	T	Y	L	P	D	T	V	V	W	K	G	C	V	Y	I	S	A	R	K	S	A	P	G	L	I	T	L	E	A	D	R	E	L	F	Y	F	G	S	G	L	P
Template Known Secondary structure					S	S	S										G	G	G											S		S	S	S						T	T	T	S		T	T	T	B														T	T																	S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	.	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		E	Q	T	D	D	E	V	R	L	A	E	L	L	T	A	A	G	I	R	A	Y	N	P	T	D	I	D	W	Y	I	X	K	K	F	X	X	I	S	V	T	A	T	A	T	A	Y	F	D	K	P	I	G	S	I	L	T	E	H	E	P	E	L	L	S	L	L	E	E	V	A	E	L	F	R	A	K	Y	G	Q	V
Template Known Secondary structure		S															T	T							S																								T	S																												T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	E	D	L	R	D	Y	V	M	Q	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	D	V	V	Q	Q	L	L	D	K	Q	R	K	X	E	T	L	T	G	Y	V	V	R	E	A	E	A	L	R	V	D	L	P	X	Y	K	R	X	Y	R	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S														T	T	T										T	T												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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