Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9J4
Confidence97.87%DateThu Jan 5 11:10:27 GMT 2012
Rank270Aligned Residues98
% Identity24%Templatec2pwzG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the apo form of e.coli malate dehydrogenase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1...... ..10.........20.. .......30.... .....40..... ....50.........60.........70....
Predicted Secondary structure 

.


...



.



.













Query SS confidence 






.














. . .











.










.




























Query Sequence  MKITVLG. CGALGQLWLTALCKQ. . . GHEVQGWLRVPQ. PYCSVNLVETD. GSIFNESLTANDPDFLATSDLLLVTLKAW
Query Conservation 


 


. 
 

   
  
   ...
  
    
   .           .             
     
 


 
   
Alig confidence 






.














...











.










.




























Template Conservation 


 


  
 

   
  
        

 
 
          

                    
  








  
Template Sequence  MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA
Template Known Secondary structure 
TTTSS
TT
SSTTTS
SS
SS

TT
S




Template Predicted Secondary structure 





























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   75....80.........90........
Predicted Secondary structure  ................








Query SS confidence  . . . . . . . . . . . . . . . .























Query Sequence  . . . . . . . . . . . . . . . . QVSDAVKSLASTLPVTTPILLIHN
Query Conservation  ................    
   
         

    
Alig confidence  ................























Template Conservation        
   
  
  
   
   
    
  
 





Template Sequence  RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP
Template Known Secondary structure 

SS


TTS
SS
Template Predicted Secondary structure 











Template SS confidence 







































   81........90.........100.........110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions