Job Description P0A9J4 Confidence 99.90% Date Thu Jan 5 11:10:27 GMT 2012 Rank 27 Aligned Residues 286 % Identity 13% Template c2p4qA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating 1; PDBTitle: crystal structure analysis of gnd1 in saccharomyces cerevisiae Resolution 2.37 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.		.	.	.
Predicted Secondary structure																																																																			.	.	.									.
Query SS confidence																																																																			.	.	.									.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	.	.	.	L	L	L	V	T	L	K	A	.	W	Q	V
Query Conservation																																																																			.	.	.									.
Alig confidence																																																	.	.																	.	.	.									.
Template Conservation																																																	.	.
Template Sequence		A	D	F	G	L	I	G	L	A	V	M	G	Q	N	L	I	L	N	A	A	D	H	G	F	T	V	C	A	Y	N	R	T	Q	S	K	V	D	H	F	L	A	N	E	A	K	G	K	.	.	S	I	I	G	A	T	S	I	E	D	F	I	S	K	L	K	R	P	R	K	V	M	L	L	V	K	A	G	A	P	V
Template Known Secondary structure			S							S													T	T								S	S	S									T	T	T	T	T	S	.	.	S					S	S							T	S		S	S									S	S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L
Query Conservation
Alig confidence																										.																																								.	.	.
Template Conservation																										.																																								.	.	.
Template Sequence		D	A	L	I	N	Q	I	V	P	L	L	E	K	G	D	I	I	I	D	G	G	N	S	H	.	F	P	D	S	N	R	R	Y	E	E	L	K	K	K	G	I	L	F	V	G	S	G	V	S	G	G	E	E	G	A	R	Y	G	P	S	L	M	P	G	.	.	.	G	S	E	E	A	W	P	H	I	K	N	I	F
Template Known Secondary structure									G	G	G			T	T							S				.														T	T										S															.	.	.			G	G	G
Template Predicted Secondary structure																										.																																								.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.	.	.	.
		157	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure								.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.
Query Sequence		Q	T	V	L	P	D	.	.	.	.	.	.	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E	D	L	R	D	Y
Query Conservation								.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	I	S	A	K	S	D	G	E	P	C	C	E	W	V	G	P	A	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	C	E	A	Y	D	I	M	K	R	L	G	G	F	T	D	K	E	I	S	D	V	F	A	K	W	N	N	G	V	L	D	S	F	L	V	E	I	T	R	D
Template Known Secondary structure					S				T	T			S							T	T																														T	T																T	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	Q	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V	K	R	K	E	S	E	Y	E	R	I	G	T
Query Conservation
Alig confidence																											.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		I	L	K	F	D	D	V	D	G	K	P	L	V	E	K	I	M	D	T	A	G	Q	K	G	T	.	.	.	.	.	G	K	W	T	A	I	N	A	L	D	L	G	M	P	V	T	L	I	G	E	A	V	F	A	R	C	L	S	A	L	K	N	E	R	I	R	A
Template Known Secondary structure				T		B		T	T	S	S	B	G	G	G	G	S								S		.	.	.	.	.												T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions