Job Description P0A9J4 Confidence 99.35% Date Thu Jan 5 11:10:27 GMT 2012 Rank 94 Aligned Residues 234 % Identity 10% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	K	A	W	Q	V	S	D	A	V	K	S
Query Conservation
Alig confidence																							.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	F	V	G	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	.	.	.	.	.	.	.	.	.	.	A	E	V	Y	G	G	K	A	A	T	L	E	K	H	P	E	V	V	F	V	I	V	P	D	R	Y	I	K	T	V	A	N	H
Template Known Secondary structure								S	T	T													.	.	.	.	B			S	S								.	.	.	.	.	.	.	.	.	.		T	T	T	T					T	T											S										T	T
Template Predicted Secondary structure																							.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.											.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D
Query Conservation
Alig confidence				.	.	.																	.	.	.	.	.																																	.	.	.
Template Conservation				.	.	.																	.	.	.	.	.																																	.	.	.
Template Sequence		L	N	.	.	.	L	G	D	A	V	L	V	H	C	S	G	F	L	S	S	E	.	.	.	.	.	I	F	K	K	S	G	R	A	S	I	H	P	N	F	S	F	L	E	K	A	L	E	X	K	D	Q	I	V	F	G	L	E	.	.	.	G	D	E	R	G	L	P	I	V	K	K	I	A	E	E	I	S	G	K
Template Known Secondary structure		T		.	.	.		S	S								S	S	S		S	T	.	.	.	.	.	T	T		S	S	S								S				T	T	G	G	G		G	G	G							.	.	.			T	T													S	S
Template Predicted Secondary structure				.	.	.																	.	.	.	.	.																																	.	.	.
Template SS confidence
		76	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E	D	L	R	D	Y	V	M	Q	V	I	D	A	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	V	I	E	K	K	K	A	Y	H	L	A	A	V	I	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	P	V	A	L	A	Y	L	S	K	R	I	Y	T	L	L	G	L	D	E	P	E	L	L	I	H	T	L	X	K	G	V	A	D	N	I	K	K	X	R
Template Known Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																T	T		S																				S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
				238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V	K	R	K	E	S
Query Conservation		.	.
Alig confidence		.	.													.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		V	E	C	S	L	T	G	P	V	K	R	G	D	W	.	.	.	.	.	.	.	.	Q	V	V	E	E	E	R	R	E	Y	E	K	I	F	G	N	T	V	L	Y	D	E	I	V	K	L	L	R	E	V	A	E	S
Template Known Secondary structure								S								.	.	.	.	.	.	.	.														S	S		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions