 |
Job Description | P0A9J4 | Confidence | 96.80% | Date | Thu Jan 5 11:10:27 GMT 2012 |
Rank | 497 | Aligned Residues | 63 |
% Identity | 17% | Template | c2f00A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; |
PDBTitle: escherichia coli murc
|
Resolution | 2.50 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | T | V | L | G | C | G | A | L | G | Q | . |
L | W | L | T | A | L | C | K | Q | G | H | E | V | Q | G | W | L | R | V | P | Q | . |
P | Y | C | S | V | N | L | V | E | T | D | G | S | I | F | N | E | S | L | T | A | N | D | P | D | F | L | A | T | S | D | L | L | L | V | T |
Query Conservation |   |
|
|   |
|
|
|   |
|   |
|
|   | . |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
| . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
Template Sequence |   |
H | I | H | F | V | G | I | G | G | A | G | X | G | G | I | A | E | V | L | A | N | E | G | Y | Q | I | S | G | S | D | L | A | P | N | P | V | T | Q | Q | L | X | N | L | G | . |
. |
. |
. |
. |
. |
A | T | I | Y | F | N | H | R | P | E | N | V | R | D | A | S | V | V | V | V | S |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | S | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . |
|  |  |  | S | S |
|
| G | G | G | G | T | T |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|