 |
Job Description | P0A9J4 | Confidence | 97.77% | Date | Thu Jan 5 11:10:27 GMT 2012 |
Rank | 290 | Aligned Residues | 70 |
% Identity | 19% | Template | c2eggA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:shikimate 5-dehydrogenase; |
PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus
|
Resolution | 2.25 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | T | V | L | G | C | G | A | L | G | Q | L | W | L | T | A | L | C | K | Q | G | H | . |
E | V | Q | G | W | L | R | V | P | Q | P | Y | C | S | V | N | L | V | E | T | D | G | S | I | F | N | E | S | L | T | A | N | D | P | D | F | L | A | T | S | D | L | L | L | V | T | L | K |
Query Conservation |   |
|
|   |
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   | . |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|
|   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
Template Sequence |   |
R | I | L | V | I | G | A | G | G | G | A | R | G | I | Y | F | S | L | L | S | T | A | A | E | R | I | D | M | A | N | R | T | V | E | K | A | E | R | L | V | R | . |
E | G | D | E | R | R | S | A | Y | F | S | L | A | E | A | E | T | R | L | A | E | Y | D | I | I | I | N | T | T | S |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | . |  | S |
| S | S | S |
|
|  |  |
|  |  |  |  |  |  | T | G | G | G |
| S |  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|