Job Description P0A9J4 Confidence 99.23% Date Thu Jan 5 11:10:27 GMT 2012 Rank 97 Aligned Residues 211 % Identity 11% Template c2d3tB_ PDB info PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v Resolution 3.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	S	K	G	T	P	I	L	M	K	D	I	N	E	H	G	I	E	Q	G	L	A	E	A	A	K	L	L	V	G	R	V	D	K	G	R	M	T	P	A	K	M	A	E	V	L	N	G	I	R	P	T	L	S	Y	G	D	F	G	N	V	D
Template Known Secondary structure		S							T	T												T	T								S	S																				T	T	T	S	S																S	S	G	G	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		66	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		L	L	L	V	T	L	K	A	.	.	W	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R
Query Conservation										.	.
Alig confidence										.	.																																																																		.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	V	V	E	A	V	V	E	N	P	K	V	K	Q	A	V	L	A	E	V	E	N	H	V	R	E	D	A	I	L	A	S	N	T	S	T	I	S	I	S	L	L	A	K	A	L	K	R	P	E	N	F	V	G	M	H	F	F	N	P	V	H	M	M	P	L	V	E	V	I	R	G	E	K	S	.	.	.	.	.
Template Known Secondary structure									S													T	T	T	S		S	S								S	S	S						T	T	T	S	S		G	G	G								S	S	T	T	T										T	T		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S
Query Conservation
Alig confidence		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	S	D	L	A	V	A	T	T	V	A	Y	A	K	K	M	G	K	N	P	I	V	V	N	D	C	P	G	F	L	V	N	R	V	L	F	P	Y	F	G	G	F	A	K	L	V	S	A	G	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	R	I	D	K	V	M	E	K	F	G	W	P	M	G
Template Known Secondary structure		.															T	T										T	T	T	T																		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.												T		S	S
Template Predicted Secondary structure		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520														.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
		224	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	L	R	D	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	Y	L	M	D	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		537	.	.	540	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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