Job Description P0A9J4 Confidence 99.85% Date Thu Jan 5 11:10:27 GMT 2012 Rank 39 Aligned Residues 247 % Identity 15% Template c2cvzD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: structure of hydroxyisobutyrate dehydrogenase from thermus2 thermophilus hb8 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	.	K	A	W	Q	V	S	D	A	V
Query Conservation																																																																								.
Alig confidence																									.																	.	.	.	.	.	.	.	.																							.
Template Conservation																									.																	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	F	I	G	L	G	A	X	G	Y	P	X	A	G	H	L	A	R	R	F	P	.	T	L	V	W	N	R	T	F	E	K	A	L	R	H	Q	E	.	.	.	.	.	.	.	.	E	F	G	S	E	A	V	P	L	E	R	V	A	E	A	R	V	I	F	T	C	L	P	T	T	R	E	V	Y	E	V	A
Template Known Secondary structure									S	T	T												S		.						S	S										.	.	.	.	.	.	.	.									G	G	G	G	G	G	S	S							S	S
Template Predicted Secondary structure																									.																	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L
Query Conservation
Alig confidence																.																																.													.																	.
Template Conservation																.																																.													.																	.
Template Sequence		E	A	L	Y	P	Y	L	R	E	G	T	Y	W	V	.	D	A	T	S	G	E	P	E	A	S	R	R	L	A	E	R	L	R	E	K	G	V	T	Y	L	D	A	P	V	S	G	.	G	T	S	G	A	E	A	G	T	L	T	V	.	X	L	G	G	P	E	E	A	V	E	R	V	R	P	F	L	.	A	Y	A
Template Known Secondary structure					T	T	T			T	T					.			S																T	T	T										S	.								T					.				S									G	G	G		.	T	T
Template Predicted Secondary structure																.																																.													.																	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.																	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	V	H	V	G	P	V	G	A	G	H	A	V	K	A	I	N	N	A	L	L	A	V	N	L	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	G	L	L	A	L	V	K	Q	G	V	S	A	E	K	A	L	E	V	I	N	A	S	S	G	R	S	N	A	T	E
Template Known Secondary structure									S	T	T																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T											T	T	S	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	L	R	D	Y	V	M	Q	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V	K	R	K	E	S	E
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	I	P	Q	R	V	L	T	R	A	F	P	K	T	F	A	L	G	L	L	V	K	D	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	A	X	G	V	L	D	G	E	K	A	P	S	P	L	L	R	L	A	R	E	V	Y	E	X	A	K	R	E
Template Known Secondary structure			T					T	T	T	S					S	S	B											.	.	.	.	.	.	.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.													.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions