Job Description P0A9J4 Confidence 99.41% Date Thu Jan 5 11:10:27 GMT 2012 Rank 88 Aligned Residues 211 % Identity 12% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.															.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	G	V	L	G	L	G	T	M	G	R	G	I	A	I	S	F	A	R	V	G	I	S	V	V	A	V	E	S	D	P	K	Q	L	D	A	A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	E	L	S	T	V	D	L	V
Template Known Secondary structure									S												T	T	T								S	S																									T	T												S		G	G	G	G	T	T		S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		68	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		L	V	T	L	K	A	.	.	W	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q
Query Conservation								.	.
Alig confidence								.	.																																																																		.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		V	E	A	V	F	E	D	M	N	L	K	K	K	V	F	A	E	L	S	A	L	C	K	P	G	A	F	L	C	T	N	T	S	A	L	N	V	D	D	I	A	S	S	T	D	R	P	Q	L	V	I	G	T	H	F	F	S	P	A	H	V	M	R	L	L	E	V	I	P	S	R	Y	S	.	.	.	.	.	.	S
Template Known Secondary structure							S																S		T	T								S	S	S							T	T	S	S		G	G	G								S	S	T	T	T										S	S		.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450							.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	T	I	A	T	V	M	S	L	S	K	K	I	G	K	I	G	V	V	V	G	N	C	Y	G	F	V	G	N	R	M	L	A	P	Y	Y	N	Q	G	F	F	L	L	E	E	G	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	D	V	D	G	V	L	E	E	F	G	F	K	M	G	P	F
Template Known Secondary structure															T	T						B			S	T	T	T	T																		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.												T		S	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500														.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
		226	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	R	D	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	S	D	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		519	520	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions