Job Description P0A9J4 Confidence 100.00% Date Thu Jan 5 11:10:27 GMT 2012 Rank 11 Aligned Residues 299 % Identity 10% Template c1yj8C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: initial structural analysis of plasmodium falciparum glycerol-3-2 phosphate dehydrogenase Resolution 2.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.								.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.										.	.																			.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.										.	.																			.	.	.	.	.	.	.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	.	.	.	.	.	.	.	H	E	V	Q	G	W	L	R	V	.	.	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	.	.	.	.	.	.	.	E	S	L	T	A	N	D	P	D	F	L	A	T	S
Query Conservation																									.	.	.	.	.	.	.										.	.																			.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.										.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	I	S	I	L	G	S	G	N	W	A	S	A	I	S	K	V	V	G	T	N	A	K	N	N	Y	L	F	E	N	E	V	R	M	W	I	R	D	E	F	E	R	M	V	D	I	I	N	N	K	H	E	N	T	K	Y	L	K	G	V	P	L	P	H	N	I	V	A	H	S	D	L	A	S	V	I	N	D	A
Template Known Secondary structure		B								S																		T	T	B		S								S														B		T	T	T	S	T	T		B			T	T					S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																				.	.	.	.	.
Query SS confidence																								.																				.	.	.	.	.
Query Sequence		D	L	L	L	V	T	L	K	A	W	Q	V	S	D	A	V	K	S	L	A	S	T	.	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	.	.	.	.	.	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H
Query Conservation																								.																				.	.	.	.	.
Alig confidence																								.																				.	.	.	.	.
Template Conservation
Template Sequence		D	L	L	I	F	I	V	P	C	Q	Y	L	E	S	V	L	A	S	I	K	E	I	K	I	A	S	H	A	K	A	I	S	L	T	K	G	F	I	V	K	K	N	Q	M	K	L	C	S	N	Y	I	S	D	F	L	N	I	P	C	S	A	L	S	G	A	N	I	A	M	D	V	A	M	E	N	F	S	E	A	T
Template Known Secondary structure		S																			T						T	T									S					T	T													S	S	S								S								T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E
Query Conservation
Alig confidence				.	.																																																						.
Template Conservation				.	.																																																						.
Template Sequence		I	G	.	.	G	N	D	K	D	S	L	V	I	W	Q	R	V	F	D	L	P	Y	F	K	I	N	C	V	N	E	T	I	E	V	E	I	C	G	A	L	K	N	I	I	T	L	A	C	G	F	C	D	G	L	N	L	P	.	T	N	S	K	S	A	I	I	R	N	G	I	N	E	M	I	L	F	G	K	V	F
Template Known Secondary structure				.	.		S														B	T	T							S		S																							T	T			.
Template Predicted Secondary structure				.	.																																																						.
Template SS confidence
		188	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230																				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Query Sequence		G	H	H	T	S	A	E	D	L	R	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	Q	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	.	.	P	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template Conservation
Template Sequence		F	Q	K	F	N	E	N	I	L	L	E	S	C	G	F	A	D	I	I	T	S	F	L	A	G	R	N	A	K	C	S	A	E	F	I	K	S	T	P	K	K	T	W	E	E	L	E	N	E	I	L	K	G	Q	K	L	Q	G	T	V	T	L	K	Y	V	Y	H	M	I	K	E	K	N	M	T	N	E	F	P	L
Template Known Secondary structure		S	S				G	G	G	G	G	S	T	T	T										S	S	S	S										T	T	T	T										T	T	T	T																			T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	R	L	F	E	M	V	K	R	K	E	S	E	Y	E	R	I	G	T	G	L	P	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	V	L	H	K	I	S	F	E	N	E	D	P	S	S	L	L	K	T	F	M	N	N	K
Template Known Secondary structure											S				T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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