Job Description P0A9J4 Confidence 100.00% Date Thu Jan 5 11:10:27 GMT 2012 Rank 16 Aligned Residues 285 % Identity 14% Template c1txgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: structure of glycerol-3-phosphate dehydrogenase from archaeoglobus2 fulgidus Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																		.	.											.	.	.	.	.	.
Query SS confidence																																		.	.											.	.	.	.	.	.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	.	.	P	Q	P	Y	C	S	V	N	L	V	.	.	.	.	.	.	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	K
Query Conservation																																		.	.											.	.	.	.	.	.
Alig confidence																																		.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	V	S	I	L	G	A	G	A	M	G	S	A	L	S	V	P	L	V	D	N	G	N	E	V	R	I	W	G	T	E	F	D	T	E	I	L	K	S	I	S	A	G	R	E	H	P	R	L	G	V	K	L	N	G	V	E	I	F	W	P	E	Q	L	E	K	C	L	E	N	A	E	V	V	L	L	G	V	S
Template Known Secondary structure								S																									G	G	G									T	T			B	T	T	T	T	B				S						G	G	G						T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																										.	.
Query SS confidence																																			.	.	.	.																										.	.
Query Sequence		A	W	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	G	T	I	E	E	.	.	.	.	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	.	.	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D
Query Conservation																																			.	.	.	.																										.	.
Alig confidence																	.																		.	.	.	.																										.	.
Template Conservation																	.
Template Sequence		T	D	G	V	L	P	V	M	S	R	I	L	P	Y	L	.	K	D	Q	Y	I	V	L	I	S	K	G	L	I	D	F	D	N	S	V	L	T	V	P	E	A	V	W	R	L	K	H	D	L	R	E	R	T	V	A	I	T	G	P	A	I	A	R	E	V	A	K	R	M	P	T	T	V	V	F	S	S	P	S	E
Template Known Secondary structure		G	G	G									T	T	T		.		S									S					T	T											T	T	S	T	T		G	G	G						S	S								T	T										S
Template Predicted Secondary structure																	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	.	.	.	.	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	T
Query Conservation																																																									.	.	.	.
Alig confidence																																																									.	.	.	.
Template Conservation
Template Sequence		S	S	A	N	K	M	K	E	I	F	E	T	E	Y	F	G	V	E	V	T	T	D	I	I	G	T	E	I	T	S	A	L	K	N	V	Y	S	I	A	I	A	W	I	R	G	Y	E	S	R	K	N	V	E	M	S	N	A	K	G	V	I	A	T	R	A	I	N	E	M	A	E	L	I	E	I	L	G	G	D	R
Template Known Secondary structure													B	T	T							S																														T																										T	S		G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.											.	.	.	.	.	.	.	.	250	.	.	.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		S	A	E	D	L	R	D	Y	V	M	Q	V	I	D	A	T	A	E	N	.	.	.	.	.	.	.	.	.	.	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	.	.	.	.	.	.	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V	K
Query Conservation																					.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	A	F	G	L	S	G	F	G	D	L	I	A	T	F	R	G	G	R	N	G	M	L	G	E	L	L	G	K	G	L	S	I	D	E	A	M	E	E	L	E	R	R	G	V	G	V	V	E	G	Y	K	T	A	E	K	A	Y	R	L	S	S	K	I	N	A	D	T	K	L	L	D	S	I	Y	R	V	L	Y
Template Known Secondary structure		G	G	G	G	S	T	T	T							T	T	T													T	T													T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions