Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9J4
Confidence99.87%DateThu Jan 5 11:10:27 GMT 2012
Rank38Aligned Residues272
% Identity11%Templatec1pgqA_
PDB info PDB header:oxidoreductase (choh(d)-nadp+(a))Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: crystallographic study of coenzyme, coenzyme analogue and substrate2 binding in 6-phosphogluconate dehydrogenase: implications for nadp3 specificity and the enzyme mechanism
Resolution3.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60..... ....70... ....
Predicted Secondary structure 























...

.
Query SS confidence 































































. . .







.



Query Sequence  KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSD. . . LLLVTLKA. WQVS
Query Conservation 

 


 
 

   
  
   
  
    
                           
     
... 


 
  .    
Alig confidence 








































..




















...







.



Template Conservation   






 

  

 

   
  
 



       
   ..

       
 
  


  
  





 

    

Template Sequence  DIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN. . EAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD
Template Known Secondary structure  S

STT


SSTT..TTTTSS

SSB
SS


S
S
Template Predicted Secondary structure 









..



















Template SS confidence 















































































   4.....10.........20.........30.........40.... .....50.........60.........70.........80.
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  DAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQ
Query Conservation   
   
         

    
                
                      

               
 
Alig confidence 






















.






































...













Template Conservation   

  
   
  
 



 


 .   
   
  
   

 








  

  






...

 

 
 
 


 
Template Sequence  NFIEKLVPLLDIGDIIIDGGNSE. YRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSLMPG. . . GNKEAWPHIKAIFQ
Template Known Secondary structure  TTT

TT

S


.TT
S

...
TTT
Template Predicted Secondary structure 










.












...

Template SS confidence 















































































   82.......90.........100.... .....110.........120.........130.........140... ......150.......
 
   158.160.... .....170.........180.........190.........200.........210.........220.........230
Predicted Secondary structure 




.......











Query SS confidence 






. . . . . . .

































































Query Sequence  TVLPDVA. . . . . . . WHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDY
Query Conservation         .......           
   
                             
   
  
 
           
Alig confidence 






.......

































































Template Conservation   

        

   
  



 





 



 

 



  


  

     

 

  

 
 
 


  

  
Template Sequence  GIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITAS
Template Known Secondary structure  S
TTTS



TTTT


TTTTT
B
Template Predicted Secondary structure 




















Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   231........240.........250.........260.........270.........280....
Predicted Secondary structure 


















Query SS confidence 





















































Query Sequence  VMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEM
Query Conservation               

  
    
  

    
     
   

  
    
  
Alig confidence 
























.....























Template Conservation 

   
       
 
 
    


.....
 

   
  
 

 
 
  
   
Template Sequence  ILKFQDADGKHLLPKIRDSAGQKGT. . . . . GKWTAISALEYGVPVTLIGEAVFA
Template Known Secondary structure 
B
TTSSBSGGGS






S.....T


Template Predicted Secondary structure 















.....




Template SS confidence 





















































   238.240.........250.........260.. .......270.........280......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions