Job Description P0A9J4 Confidence 100.00% Date Thu Jan 5 11:10:27 GMT 2012 Rank 15 Aligned Residues 301 % Identity 16% Template c1m67A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of leishmania mexicana gpdh complexed with inhibitor2 2-bromo-6-hydroxy-purine Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	.	.	.	.	.	.	.	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	K	A
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	A	V	V	F	G	S	G	A	F	G	T	A	L	A	M	V	L	S	K	K	C	R	E	V	C	V	W	H	M	N	E	E	E	V	R	L	V	N	E	K	R	E	N	V	L	F	L	K	G	V	Q	L	A	S	N	I	T	F	T	S	D	V	E	K	A	Y	N	G	A	E	I	I	L	F	V	I	P	T
Template Known Secondary structure										S												T	T									S												T	S		T	T	T	S	T	T					T	T					S							T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.														.	.
Query SS confidence																.	.	.	.	.														.	.
Query Sequence		W	Q	V	S	D	A	V	K	S	L	A	S	T	L	.	.	.	.	.	P	V	T	T	P	I	L	L	I	H	N	G	M	.	.	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N	V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D
Query Conservation																.	.	.	.	.														.	.
Alig confidence																.	.	.	.	.														.	.
Template Conservation
Template Sequence		Q	F	L	R	G	F	F	E	K	S	G	G	N	L	I	A	Y	A	K	E	K	Q	V	P	V	L	V	C	T	K	G	I	E	R	S	T	L	K	F	P	A	E	I	I	G	E	F	L	P	S	P	L	L	S	V	L	A	G	P	S	F	A	I	E	V	A	T	G	V	F	T	C	V	S	I	A	S	A	D	I
Template Known Secondary structure																							T									S			T	T	T									T	T	T	S		G	G	G						S	S								T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																	.	.																																																													.	.	.
Query SS confidence																	.	.																																																													.	.	.
Query Sequence		G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	.	.	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I	C	E	E	V	A	A	V	I	E	R	E	G	H	H	.	.	.
Query Conservation																	.	.																																																													.	.	.
Alig confidence																	.	.																																						.																							.	.	.
Template Conservation																																																								.
Template Sequence		N	V	A	R	R	L	Q	R	I	M	S	T	G	D	R	S	F	V	C	W	A	T	T	D	T	V	G	C	E	V	A	S	A	V	K	N	V	L	A	I	G	S	G	V	A	N	G	L	G	M	G	L	N	A	.	R	A	A	L	I	M	R	G	L	L	E	I	R	D	L	T	A	A	L	G	G	D	G	S	A
Template Known Secondary structure												S		T	T	S	S							S																									T	T						.																			T	T				T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
			222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.								.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.																						.	.	.	.	.	.	.
Query SS confidence		.																						.	.	.	.	.	.	.
Query Sequence		.	T	S	A	E	D	L	R	D	Y	V	M	Q	V	I	D	A	T	A	E	N	I	.	.	.	.	.	.	.	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L	F	E	M	V	K	R	K	E	S	E	Y	E
Query Conservation		.																						.	.	.	.	.	.	.
Alig confidence		.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	G	L	A	G	L	G	D	L	Q	L	T	C	S	S	E	L	S	R	N	F	T	V	G	K	K	L	G	K	G	L	P	I	E	E	I	Q	R	A	V	A	E	G	V	A	T	A	D	P	L	M	R	L	A	K	Q	L	K	V	K	M	P	L	C	H	Q	I	Y	E	I	V	Y	K	K	K	N	P	R	D
Template Known Secondary structure		T	T	S	T	T	T									S		T	T	S												T																											T	T															S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		294	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	T	G	L	P	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	D	L	L	S	C	G
Template Known Secondary structure							G	G	G
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions