Job Description P0A9J4 Confidence 98.02% Date Thu Jan 5 11:10:27 GMT 2012 Rank 223 Aligned Residues 108 % Identity 16% Template c1dxyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase Resolution 1.86 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		M	K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	K	.	A	W	Q	V	S	D	A
Query Conservation																																																																										.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	V	G	V	M	G	T	G	H	I	G	Q	V	A	I	K	L	F	K	G	F	G	A	K	V	I	A	Y	D	P	Y	P	M	K	G	D	H	.	.	.	.	.	.	.	.	.	.	.	P	D	F	D	Y	V	S	L	E	D	L	F	K	Q	S	D	V	I	D	L	H	V	P	G	I	E	Q	N	T	H	I
Template Known Secondary structure		S								S													T	T								S	S			S	S			.	.	.	.	.	.	.	.	.	.	.	T	T														S										G	G	G	T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.												.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																				.	.
Query SS confidence			.																				.	.
Query Sequence		V	.	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	.	.	M	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T
Query Conservation			.																				.	.
Alig confidence			.																				.	.
Template Conservation
Template Sequence		I	N	E	A	A	F	N	L	M	K	P	G	A	I	V	I	N	T	A	R	P	N	L	I	D	T	Q	A	M	L	S	N	L	K	S	G	K	L	A	G	V	G	I
Template Known Secondary structure		B								S		T	T							S		T	T	S	B											T	T	S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions