Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9J4
Confidence98.64%DateThu Jan 5 11:10:27 GMT 2012
Rank121Aligned Residues105
% Identity17%Templatec1a5zA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: lactate dehydrogenase from thermotoga maritima (tmldh)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.... .....30.........40 .........50.........60.........70....
Predicted Secondary structure 






..

..

















..
Query SS confidence 























. .















. .

































. .
Query Sequence  MKITVLGCGALGQLWLTALCKQGH. . EVQGWLRVPQPYCSVN. . LVETDGSIFNESLTANDPDFLATSDLLLVTLKAW. .
Query Conservation 


 


 
 

   
  
   
 .. 
    
         ..                  
     
 


 
   ..
Alig confidence 























..















..

































..
Template Conservation 


 




 

   
  
       

 
 

        
 

                  

  





  
    
Template Sequence  MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQK
Template Known Secondary structure 


ST

S
SSGGGS




GGGGTT
S






Template Predicted Secondary structure 




























Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   75....80.........90.........100......
Predicted Secondary structure  ..............











Query SS confidence  . . . . . . . . . . . . . .































Query Sequence  . . . . . . . . . . . . . . QVSDAVKSLASTLPVTTPILLIHNGMGTIEEL
Query Conservation  ..............    
   
         

    
       
Alig confidence  ..............












.

















Template Conservation   
  
      
  
   
   
    .
 
 

  


    
  
Template Sequence  PGETRLQLLGRNARVMKEIARNVSKYA. PDSIVIVVTNPVDVLTYF
Template Known Secondary structure  SS


.TT

SSS
Template Predicted Secondary structure 



.




Template SS confidence 













































   105....110.........120.........130. ........140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions