Job Description P0ADI9 Confidence 0.62% Date Thu Jan 5 11:21:07 GMT 2012 Rank 39 Aligned Residues 104 % Identity 18% Template c3am6C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:rhodopsin-2; PDBTitle: crystal structure of the proton pumping rhodopsin ar2 from marine alga2 acetabularia acetabulum Resolution 3.20 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		Y	R	G	P	T	W	Q	R	W	V	F	K	P	L	T	L	L	L	L	L	L	L	A	W	Q	A	P	M	F	D	A	I	S	Y	L	V	L	A	G	L	.	.	.	.	.	C	A	S	L	L	G	D	A	L	T	L	L	P	R	Q	R	L	M	Y	A	I	G	A	F	F	L	S	H	L	L	Y	T	I	Y	F
Query Conservation																																										.	.	.	.	.
Alig confidence																																										.	.	.	.	.
Template Conservation
Template Sequence		E	R	Q	V	V	Y	A	R	Y	I	D	W	V	L	T	T	P	L	L	L	L	D	L	I	V	M	T	K	M	G	G	V	M	I	S	W	V	I	G	A	D	I	F	M	I	V	F	G	I	L	G	A	F	E	D	E	H	K	F	K	W	V	Y	F	I	A	G	C	V	M	Q	A	V	L	T	Y	G	M	Y	N
Template Known Secondary structure		S	B	B			T																			T	T	S																										T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
			95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	S	Q	M	T	L	S	F	F	W	P	L	P	L	V	L	L	V	L	G	A	L	L	L	A	I	I	W	T
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	T	W	K	D	D	K	S	P	E	Y	H	S	S	Y	V	S	L	L	V	F	L	S	I	L	W	V	F	Y	P
Template Known Secondary structure					S																							T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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