Return to main results Retrieve Phyre Job Id

Job DescriptionP39360
Confidence92.20%DateThu Jan 5 11:59:50 GMT 2012
Rank257Aligned Residues44
% Identity16%Templated2fd5a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10......... 20... ......30.........40....
Predicted Secondary structure 



.

..





Query SS confidence 


















.



. .




















Query Sequence  MVRKGCNSLVRAEKILTHI. AWVG. . MASYMELLNKFQYPKSSLLNL
Query Conservation 
 
  
 

 


 


 
.
   ..  
 



  


  

  

Alig confidence 


















.



..




















Template Conservation 
       
  
  

  
    
    

  

  



  
 
  
Template Sequence  MSDKKTQTRARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFYAH
Template Known Secondary structure 


TTTS

TT

GGGGGGT
Template Predicted Secondary structure 











Template SS confidence 














































   1........10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions