Job Description P39360 Confidence 91.37% Date Thu Jan 5 11:59:50 GMT 2012 Rank 285 Aligned Residues 85 % Identity 14% Template d2esha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.										.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		E	K	I	L	T	H	I	A	W	V	G	M	A	S	Y	M	E	L	L	N	K	F	.	.	.	.	.	.	.	.	.	Q	Y	P	K	S	S	L	L	N	L	L	N	V	M	V	D	C	G	F	L	I	K	N	K	N	G	Y	.	.	.	.	.	.	.	Y	S	L	G	I	K	N	Y	E	L	G	C	Q	A	L
Query Conservation																								.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence											.													.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		S	T	I	L	L	L	V	A	E	.	K	P	S	H	G	Y	E	L	A	E	R	L	A	E	F	G	I	E	I	P	G	I	G	H	M	G	N	I	Y	R	V	L	A	D	L	E	E	S	G	F	L	S	T	E	W	D	T	T	V	S	P	P	R	K	I	Y	R	I	T	P	Q	G	K	L	Y	L	R	E	I	L
Template Known Secondary structure											.	S		B											T	T			S	S	T	T																	T	T	S								S	S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		16	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		77	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		H	R	Q	N	.	I	F	E	V	T	K	R	P	M	Q	E	L	S	L	K	S	G	L
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		R	S	L	E	D	M	K	R	R	I	E	T	L	E	E	R	I	K	R	V	L	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions