Job Description P39360 Confidence 94.94% Date Thu Jan 5 11:59:50 GMT 2012 Rank 190 Aligned Residues 50 % Identity 16% Template d2dk5a1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain RPO3F domain-like Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.		.	.	.
Predicted Secondary structure											.	.																																		.	.	.	.	.						.
Query SS confidence											.	.																																		.	.	.	.	.						.
Query Sequence		I	L	T	H	I	A	W	V	G	.	.	M	A	S	Y	M	E	L	L	N	K	F	Q	Y	P	K	S	S	L	L	N	L	L	N	V	M	V	D	C	G	F	L	I	K	.	.	.	.	.	N	K	N	G	Y	.	Y	S	L
Query Conservation											.	.																																		.	.	.	.	.						.
Alig confidence											.	.																																		.	.	.	.	.						.
Template Conservation
Template Sequence		V	Y	Q	I	I	E	D	A	G	N	K	G	I	W	S	R	D	V	R	Y	K	S	N	L	P	L	T	E	I	N	K	I	L	K	N	L	E	S	K	K	L	I	K	A	V	K	S	V	A	A	S	K	K	K	V	Y	M	L
Template Known Secondary structure											T	T											T	T																T	T	S							S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions