Return to main results Retrieve Phyre Job Id

Job DescriptionP39360
Confidence86.31%DateThu Jan 5 11:59:50 GMT 2012
Rank470Aligned Residues49
% Identity24%Templated1in4a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Helicase DNA-binding domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20. .. ......30.........40....... ..50.........60.
Predicted Secondary structure  ..

.





.







Query SS confidence 








. .

.























.













Query Sequence  EKILTHIAW. . VG. MASYMELLNKFQYPKSSLLNLLNV. MVDCGFLIKNKNGY
Query Conservation 
 


 

 ..  .  
 



  


  

  


 
.
   
 
 
   
 
Alig confidence 








..

.























.













Template Conservation    

  

  
 





 


  
 
   


  





  
 
 

 


Template Sequence  RKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGR
Template Known Secondary structure  STT

B
TS
TTTSTT
Template Predicted Secondary structure 








Template SS confidence 




















































   262.......270.........280.........290.........300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions