Return to main results Retrieve Phyre Job Id

Job DescriptionP39360
Confidence97.36%DateThu Jan 5 11:59:50 GMT 2012
Rank107Aligned Residues58
% Identity5%Templated1g3wa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Iron-dependent repressor protein
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20... ......30.........40.........50.........60....
Predicted Secondary structure 

.














Query SS confidence 
















.








































Query Sequence  NSLVRAEKILTHIAWVG. MASYMELLNKFQYPKSSLLNLLNVMVDCGFLIKNKNGYYSL
Query Conservation   

 


 


 

   .  
 



  


  

  


 

   
 
 
   
 
 
Alig confidence 
















.








































Template Conservation   
 



  
  
      
    

  
 

  


 




   


  
    
 
Template Sequence  DTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQM
Template Known Secondary structure 
T


BT

TTS

TTSB
Template Predicted Secondary structure 


















Template SS confidence 


























































   6...10.........20.........30.........40.........50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions