Job Description P39360 Confidence 86.41% Date Thu Jan 5 11:59:50 GMT 2012 Rank 467 Aligned Residues 73 % Identity 15% Template c3jyvT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:s19e protein; PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution Resolution 8.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.															.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	E	K	I	L	T	H	I	A	W	V	G	M	A	S	Y	M	E	L	L	N	K	F	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	S	S	L	L	N	L	L	N	V	M	V	D	C	G	F	L	I	K	N	K	N	G	Y	Y	S	L	G	I	K	N	Y	E	L	G	C	Q	A	L
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		R	A	A	S	V	A	R	H	I	Y	M	R	K	Q	V	G	V	G	K	L	N	K	L	Y	G	G	A	K	S	R	G	V	R	P	Y	K	H	I	D	A	S	G	S	I	N	R	K	V	L	Q	A	L	E	K	I	G	I	V	E	I	S	P	K	G	G	R	R	I	S	E	N	G	Q	R	D	.	.	.	.	.
Template Known Secondary structure													T			S		S	G	G	G	T	S	S	S	S			T	T	T				S	S	S																		T	T	T	S			B		T	T	S	S	B										.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	Q	N	I	F	E	V	T	K	R	P	M	Q	E	L
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	D	R	I	A	A	Q	T	L	E	E	D
Template Known Secondary structure		.	.	.	.
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						132	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions