Return to main results Retrieve Phyre Job Id

Job DescriptionP39360
Confidence93.02%DateThu Jan 5 11:59:50 GMT 2012
Rank240Aligned Residues37
% Identity16%Templatec3edpB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:lin2111 protein; PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50....... ..60..
Predicted Secondary structure 







.



Query SS confidence 































.




Query Sequence  SYMELLNKFQYPKSSLLNLLNVMVDCGFLIKN. KNGYY
Query Conservation 
 



  


  

  


 

   
 
 
 .  
 
Alig confidence 































.




Template Conservation 

 


    


 


 

  
  



    
 


Template Sequence  NETALQEIYSSSRTTIRRAVDLLVEEGLVVRKNGVGLY
Template Known Secondary structure 
TT

TTSTTT
Template Predicted Secondary structure 








Template SS confidence 





































   32.......40.........50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions