Job Description P39360 Confidence 100.00% Date Thu Jan 5 11:59:50 GMT 2012 Rank 15 Aligned Residues 162 % Identity 19% Template c3bjnA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, putative; PDBTitle: crystal structure of c-terminal domain of putative transcriptional2 regulator from vibrio cholerae, targeted domain 79-240 Resolution 1.65 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	H	R	Q	N	I	F	E	V	T	K	R	P	M	Q	E	L	S	L	K	S	G	L	V	C	H	L	G	A	M	E	S	I	S	A	I	Y	L	D	K	I	E	S	P	D	S	V	P	T	S	K	S	W	I	G	K	K	L	E	L	H	I	T	A	L	G	K	A	L	L	A	W	K	T	R	E	E	L
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		S	Y	E	T	S	Q	H	N	L	D	A	V	E	A	V	L	S	R	L	Q	K	Q	T	G	E	X	A	A	Y	X	V	P	V	G	Y	R	A	L	C	V	S	Q	R	E	S	X	Q	A	L	R	.	C	S	F	V	Q	G	Q	S	Q	P	L	L	R	G	A	S	S	K	V	X	L	A	Y	X	P	A	A	R	C
Template Known Secondary structure				T	T	T	S	T	T																S	S									T	T											S	S				.		S			T	T					T	T	S											S
Template Predicted Secondary structure																																																				.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	F	L	E	A	L	T	L	T	P	H	T	R	N	T	F	T	D	K	K	L	F	L	E	E	L	Q	K	T	R	L	R	G	W	A	I	D	N	E	E	S	T	Y	G	A	V	C	L	S	M	P	V	F	N	M	Y	N	R	V	N	Y	A	I	S	L	S	G	D	P	V	V	Y	S	G	N	K	I	D	S
Query Conservation
Alig confidence									.	.	.	.	.	.	.																																										.
Template Conservation									.	.	.	.	.	.	.																																										.
Template Sequence		E	K	I	L	R	Y	F	.	.	.	.	.	.	.	G	E	D	P	T	L	D	K	W	Q	S	E	F	E	K	I	R	R	H	G	Y	A	V	S	T	S	E	I	D	P	G	V	S	G	I	S	A	P	V	X	K	.	G	S	K	L	I	G	A	I	S	V	X	A	P	A	H	R	V	E	S	N	K	Q	R	I
Template Known Secondary structure								T	.	.	.	.	.	.	.	T			T	T	S														T	S					S	S	S	S	T	T											.	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.																																										.
Template SS confidence
		158	.	160	.	.	.	.								.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	E	L	L	R	K	C	A	E	Q	I
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		I	L	H	.	V	L	Q	A	A	R	A	L
Template Known Secondary structure					.							T
Template Predicted Secondary structure					.
Template SS confidence
		230	.	.		.	.	.	.	.	.	.	240

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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