Return to main results Retrieve Phyre Job Id

Job DescriptionP39360
Confidence84.84%DateThu Jan 5 11:59:50 GMT 2012
Rank494Aligned Residues42
% Identity12%Templatec2qcoA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:cmer; PDBTitle: crystal structure of the transcriptional regulator cmer from2 campylobacter jejuni
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10..... ....20... ......30.........40....
Predicted Secondary structure 

.

..





Query SS confidence 












.







. .




















Query Sequence  RKGCNSLVRAEKI. LTHIAWVG. . MASYMELLNKFQYPKSSLLNL
Query Conservation 
  
 

 


 
.

 

   ..  
 



  


  

  

Alig confidence 












.







..




















Template Conservation   
    
  

 

  

   
    

  

  



  


 
Template Sequence  QKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSGGSYSNIYDG
Template Known Secondary structure  TTTTT


TT
TT
SSS
Template Predicted Secondary structure 










Template SS confidence 












































   910.........20.........30.........40.........50...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions