Job Description P39360 Confidence 100.00% Date Thu Jan 5 11:59:50 GMT 2012 Rank 2 Aligned Residues 248 % Identity 18% Template c2g7uB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: 2.3 a structure of putative catechol degradative operon regulator from2 rhodococcus sp. rha1 Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		R	K	G	C	N	S	L	V	R	A	E	K	I	L	T	H	I	A	W	V	G	.	M	A	S	Y	M	E	L	L	N	K	F	Q	Y	P	K	S	S	L	L	N	L	L	N	V	M	V	D	C	G	F	L	I	K	N	K	N	G	Y	Y	S	L	G	I	K	N	Y	E	L	G	C	Q	A	L	H	R	Q	N	I
Query Conservation																							.
Alig confidence																							.																																			.
Template Conservation																																																										.
Template Sequence		R	D	Y	I	Q	S	I	E	R	G	F	A	V	L	L	A	F	D	A	Q	R	P	N	P	T	L	A	E	L	A	T	E	A	G	L	S	R	P	A	V	R	R	I	L	L	T	L	Q	K	L	G	Y	V	A	G	S	.	G	G	R	W	S	L	T	P	R	V	L	S	I	G	Q	H	Y	S	E	S	H	A	L
Template Known Secondary structure																	T		B	T	T	B		S		B									T																T	T	S					.	T	T						T												T
Template Predicted Secondary structure																																																										.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	V	T	K	R	P	M	Q	E	L	S	L	K	S	G	L	V	C	H	L	G	A	M	E	S	I	S	A	I	Y	L	D	K	I	E	S	P	D	S	V	P	T	S	K	S	W	I	G	K	K	L	E	L	H	I	T	A	L	G	K	A	L	L	A	W	K	T	R	E	E	L	D	Y	F	L	E	A	L	T
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		I	E	A	A	X	P	R	L	L	E	V	A	E	K	T	Q	E	S	A	S	L	G	V	L	D	G	A	D	V	V	Y	A	A	R	V	P	V	R	R	I	X	S	I	N	V	.	S	V	G	T	R	V	P	A	Y	A	T	S	X	G	R	A	L	L	A	W	A	P	A	D	V	V	E	R	V	V	A	E	S	T
Template Known Secondary structure																	S	S									T	T													S	S					.		T	T					S	T	T	S								T	T	S
Template Predicted Secondary structure																																															.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		L	T	P	H	T	R	N	T	F	T	D	K	K	L	F	L	E	E	L	Q	K	T	R	L	R	G	W	A	I	D	N	E	E	S	T	Y	G	A	V	C	L	S	M	P	V	F	N	M	Y	N	R	V	N	Y	A	I	S	L	S	G	D	P	V	V	Y	S	G	N	K	.	I	D	S	Y	L	E	L	L	R	K
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		F	Q	K	L	G	P	E	T	I	G	T	A	A	E	L	E	R	E	L	A	K	V	R	E	Q	G	F	A	L	T	S	E	E	L	E	K	G	L	I	S	L	A	A	P	V	H	D	A	G	G	T	V	V	G	V	V	A	C	S	T	S	S	A	R	N	T	P	A	Q	F	R	E	Q	A	V	P	C	V	L	A
Template Known Secondary structure						S	T	T																			S	S					S	S	S	S	T	T											T	T	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	E	Q	I	S	Y	G	L	G	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	A	L	S	A	D	X	G	F	A
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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