Job Description P39360 Confidence 97.20% Date Thu Jan 5 11:59:50 GMT 2012 Rank 128 Aligned Residues 221 % Identity 16% Template c1stzB_ PDB info PDB header:transcription Chain: B: PDB Molecule:heat-inducible transcription repressor hrca homolog; PDBTitle: crystal structure of a hypothetical protein at 2.2 a resolution Resolution 2.20 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.					.		.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.
Predicted Secondary structure															.	.	.	.		.											.	.																								.																	.	.	.	.	.
Query SS confidence															.	.	.	.		.											.	.																								.																	.	.	.	.	.
Query Sequence		V	R	A	E	K	I	L	T	H	I	A	W	V	.	.	.	.	G	.	M	A	S	Y	M	E	L	L	N	K	.	.	F	Q	Y	P	K	S	S	L	L	N	L	L	N	V	M	V	D	C	G	F	L	I	K	.	N	K	N	G	Y	Y	S	L	G	I	K	N	Y	E	L	G	.	.	.	.	.	C	Q	A	L
Query Conservation															.	.	.	.		.											.	.																								.																	.	.	.	.	.
Alig confidence															.	.	.	.		.											.	.																								.																	.	.	.	.	.
Template Conservation
Template Sequence		D	R	Q	R	K	V	L	Y	C	I	V	R	E	Y	I	E	N	K	K	P	V	S	S	Q	R	V	L	E	V	S	N	I	E	F	S	S	A	T	I	R	N	D	M	K	K	L	E	Y	L	G	Y	I	Y	Q	P	H	T	S	A	G	R	I	P	T	D	K	G	L	R	F	Y	Y	E	E	M	L	K	I	S	M
Template Known Secondary structure																				S		B									S				S															T	T	S					S	S		S		B
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		H	R	Q	N	I	F	E	V	T	K	R	P	M	Q	E	L	S	L	K	S	G	L	V	C	H	L	G	A	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	S	A	I	Y	L	D	K	I	E	S	P	D	S	V	P	T	S	K	S	W	I	G	K	K	L	E	.	.	.	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	A	D	P	E	K	V	L	F	L	A	G	N	L	L	A	R	L	T	E	G	Y	V	L	I	E	R	P	N	T	R	D	L	K	I	L	R	V	M	L	I	P	V	S	E	D	Y	L	I	F	S	I	L	T	E	F	G	V	S	K	V	T	P	I	K	T	Q	E	R	L	N	W	E	E	I	E	R	Q	L
Template Known Secondary structure																						T										T	T	S		B										S	S	S									T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
																																									135	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	I	T	A	L	G	K	A	L	L	A	.	W	K	T	R	E	E	L	D	Y	F	L	E	A	L	T	L	T	P	H	T	R	N	T	F	T	D	K	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	L	L	R	G	R	T	V	G	E	V	L	M	G	K	I	E	S	L	K	G	S	G	F	L	R	L	I	E	S	L	I	G	E	T	V	E	R	Y	L	D	A	G	L	E	N	L	L	K	D	E	T	L	T	L	E	D	I	R	N	L	L	E	E	V	K	.	.	.	.	.	.	.	.	.	.	D	Q	K
Template Known Secondary structure						T	T		B						T	T			G	G	G	G	S	S											T					S												S	T	T													T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.											.	260	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		L	F	L	E	E	L	Q	K	T	R	L	R	G	W	A	I	D	N	E	E	S	T	.	.	.	.	.	Y	G	A	V	C	L	S	M	P	V	F	N	M	Y	N	R	V	N	Y	A	I	S	L	S	G	D	P	V	V	Y	S	G	N	K	I	D	S	Y	L	E	L	L	R	K	C	A	E	Q	I	S	Y	G	L
Query Conservation																								.	.	.	.	.
Alig confidence								.	.	.	.													.	.	.	.	.												.															.	.	.	.
Template Conservation								.	.	.	.																													.															.	.	.	.
Template Sequence		F	L	E	S	L	V	.	.	.	.	G	E	G	I	T	V	R	I	G	R	E	I	G	R	K	K	L	E	K	F	A	V	F	S	G	K	Y	F	.	K	G	E	S	P	I	G	S	V	Y	L	F	T	S	.	.	.	.	K	V	T	K	Y	D	R	N	H	R	V	F	E	Y	I	L	N	R	L	S	E	Y	F
Template Known Secondary structure								.	.	.	.		S	S	S					G	G	G	G	S		G	G	G	T	T										.		T	T												.	.	.	.	S	S	S
Template Predicted Secondary structure								.	.	.	.																													.															.	.	.	.
Template SS confidence
		262	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.					310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions