Email l.a.kelley@imperial.ac.uk Description P0AG48 Date Thu Jan 5 11:28:07 GMT 2012 Unique Job ID 75bda8a866578675

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2qamr1 100.0 100 Fold:L21p-like Superfamily:L21p-like Family:Ribosomal protein L21p 2 c3bboT_ 100.0 30 PDB header:ribosome Chain: T: PDB Molecule:ribosomal protein l21; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 3 d2j01v1 100.0 44 Fold:L21p-like Superfamily:L21p-like Family:Ribosomal protein L21p 4 d2zjro1 100.0 44 Fold:L21p-like Superfamily:L21p-like Family:Ribosomal protein L21p 5 c2gu9B_ 54.7 14 PDB header:immune system Chain: B: PDB Molecule:tetracenomycin polyketide synthesis protein; PDBTitle: crystal structure of xc5357 from xanthomonas campestris: a2 putative tetracenomycin polyketide synthesis protein3 adopting a novel cupin subfamily structure 6 c2lc4A_ 51.2 19 PDB header:structural protein Chain: A: PDB Molecule:pilp protein; PDBTitle: solution structure of pilp from pseudomonas aeruginosa 7 d2arca_ 50.7 14 Fold:Double-stranded beta-helix Superfamily:Regulatory protein AraC Family:Regulatory protein AraC 8 c3ibmB_ 47.0 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila 9 c3ossC_ 43.9 23 PDB header:protein transport Chain: C: PDB Molecule:type 2 secretion system, gspc; PDBTitle: the crystal structure of enterotoxigenic escherichia coli gspc-gspd2 complex from the type ii secretion system 10 c3m9bK_ 41.5 13 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 11 c3d82A_ 40.3 9 PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution 12 c2ivwA_ 40.2 15 PDB header:lipoprotein Chain: A: PDB Molecule:pilp pilot protein; PDBTitle: the solution structure of a domain from the neisseria2 meningitidis pilp pilot protein. 13 c3kgzA_ 39.8 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: crystal structure of a cupin 2 conserved barrel domain protein from2 rhodopseudomonas palustris 14 d1sfna_ 38.8 10 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 15 d1sq4a_ 38.2 24 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 16 d1sefa_ 37.4 10 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 17 c1sefA_ 37.4 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of cupin domain protein ef2996 from enterococcus2 faecalis 18 d1rc6a_ 37.1 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like 19 d1o4ta_ 36.1 23 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 20 c2vpvA_ 36.1 10 PDB header:cell cycle Chain: A: PDB Molecule:protein mif2; PDBTitle: dimerization domain of mif2p 21 d1vj2a_ not modelled 36.0 19 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like 22 c3cewA_ not modelled 34.4 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized cupin protein; PDBTitle: crystal structure of a cupin protein (bf4112) from bacteroides2 fragilis. northeast structural genomics consortium target bfr205 23 d1y9qa2 not modelled 33.5 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Probable transcriptional regulator VC1968, C-terminal domain 24 c3lwcA_ not modelled 28.8 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution 25 c2ozjB_ not modelled 27.6 10 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel; PDBTitle: crystal structure of a cupin superfamily protein (dsy2733) from2 desulfitobacterium hafniense dcb-2 at 1.60 a resolution 26 c3h7yA_ not modelled 27.1 14 PDB header:biosynthetic protein Chain: A: PDB Molecule:bacilysin biosynthesis protein bacb; PDBTitle: crystal structure of bacb, an enzyme involved in bacilysin synthesis,2 in tetragonal form 27 c3fjsC_ not modelled 26.4 24 PDB header:biosynthetic protein Chain: C: PDB Molecule:uncharacterized protein with rmlc-like cupin fold; PDBTitle: crystal structure of a putative biosynthetic protein with rmlc-like2 cupin fold (reut_b4087) from ralstonia eutropha jmp134 at 1.90 a3 resolution 28 d1yhfa1 not modelled 26.0 33 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 29 c3l2hD_ not modelled 25.8 14 PDB header:isomerase Chain: D: PDB Molecule:putative sugar phosphate isomerase; PDBTitle: crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution 30 c3jzvA_ not modelled 25.1 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rru_a2000; PDBTitle: crystal structure of rru_a2000 from rhodospirillum rubrum: a cupin-22 domain. 31 d1wpga1 not modelled 22.9 16 Fold:Double-stranded beta-helix Superfamily:Calcium ATPase, transduction domain A Family:Calcium ATPase, transduction domain A 32 c2pfwB_ not modelled 20.1 10 PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution 33 c1d8lA_ not modelled 19.3 17 PDB header:gene regulation Chain: A: PDB Molecule:protein (holliday junction dna helicase ruva); PDBTitle: e. coli holliday junction binding protein ruva nh2 region2 lacking domain iii 34 c3i7dB_ not modelled 18.9 14 PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase; PDBTitle: crystal structure of sugar phosphate isomerase from a cupin2 superfamily spo2919 from silicibacter pomeroyi (yp_168127.1) from3 silicibacter pomeroyi dss-3 at 2.30 a resolution 35 d1cuka3 not modelled 18.6 17 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA helicase RuvA subunit, N-terminal domain 36 d1vqow1 not modelled 18.5 44 Fold:Ribosomal protein L30p/L7e Superfamily:Ribosomal protein L30p/L7e Family:Ribosomal protein L30p/L7e 37 d1v70a_ not modelled 18.0 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 38 d2pyta1 not modelled 15.4 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:EutQ-like 39 d2f4pa1 not modelled 15.1 19 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like 40 c2h5xA_ not modelled 14.6 17 PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruva; PDBTitle: ruva from mycobacterium tuberculosis 41 c2q30C_ not modelled 13.6 10 PDB header:unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a rmlc-like cupin protein (dde_2303) from2 desulfovibrio desulfuricans subsp. at 1.94 a resolution 42 c1hjpA_ not modelled 13.2 17 PDB header:dna recombination Chain: A: PDB Molecule:ruva; PDBTitle: holliday junction binding protein ruva from e. coli 43 c3acgA_ not modelled 13.1 17 PDB header:hydrolase Chain: A: PDB Molecule:beta-1,4-endoglucanase; PDBTitle: crystal structure of carbohydrate-binding module family 282 from clostridium josui cel5a in complex with cellobiose 44 d1o5ua_ not modelled 12.7 23 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Hypothetical protein TM1112 45 d1bvsa3 not modelled 12.6 15 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA helicase RuvA subunit, N-terminal domain 46 d1ixra2 not modelled 12.2 20 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA helicase RuvA subunit, N-terminal domain 47 c3fp9E_ not modelled 12.1 13 PDB header:hydrolase Chain: E: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of intern domain of proteasome-associated2 atpase, mycobacterium tuberculosis 48 c3rnsA_ not modelled 11.8 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis 49 c2ejgD_ not modelled 11.5 13 PDB header:ligase Chain: D: PDB Molecule:149aa long hypothetical methylmalonyl-coa decarboxylase PDBTitle: crystal structure of the biotin protein ligase (mutation r48a) and2 biotin carboxyl carrier protein complex from pyrococcus horikoshii3 ot3 50 d1vcpa_ not modelled 10.8 38 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 51 c2wkdA_ not modelled 10.5 19 PDB header:dna binding protein Chain: A: PDB Molecule:orf34p2; PDBTitle: crystal structure of a double ile-to-met mutant of protein2 orf34 from lactococcus phage p2 52 d1wyka_ not modelled 10.3 38 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 53 c2i45C_ not modelled 10.1 18 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein nmb1881 from neisseria meningitidis 54 c1kxfA_ not modelled 9.5 38 PDB header:viral protein Chain: A: PDB Molecule:sindbis virus capsid protein; PDBTitle: sindbis virus capsid, (wild-type) residues 1-264,2 tetragonal crystal form (form ii) 55 d2b8ma1 not modelled 9.3 19 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:MJ0764-like 56 d2cqaa1 not modelled 9.3 25 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:TIP49 domain 57 d1ep5a_ not modelled 9.3 38 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 58 d1uwwa_ not modelled 8.3 17 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 28 carbohydrate binding module, CBM28 59 c1b5fD_ not modelled 7.7 19 PDB header:hydrolase Chain: D: PDB Molecule:protein (cardosin a); PDBTitle: native cardosin a from cynara cardunculus l. 60 c2o8qA_ not modelled 7.5 10 PDB header:metal binding protein Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a protein with a cupin-like fold and unknown2 function (bxe_c0505) from burkholderia xenovorans lb400 at 1.55 a3 resolution 61 c2x48B_ not modelled 7.2 22 PDB header:viral protein Chain: B: PDB Molecule:cag38821; PDBTitle: orf 55 from sulfolobus islandicus rudivirus 1 62 c3cw3A_ not modelled 7.1 27 PDB header:oncoprotein Chain: A: PDB Molecule:absent in melanoma 1 protein; PDBTitle: crystal structure of aim1g1 63 d2ae8a2 not modelled 6.7 12 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Imidazole glycerol phosphate dehydratase 64 d1dgwa_ not modelled 6.6 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 65 c3a35B_ not modelled 6.6 14 PDB header:luminescent protein Chain: B: PDB Molecule:lumazine protein; PDBTitle: crystal structure of lump complexed with riboflavin 66 c3i0mA_ not modelled 6.3 14 PDB header:cell cycle Chain: A: PDB Molecule:dna repair and telomere maintenance protein nbs1; PDBTitle: structure of the s. pombe nbs1 fha/brct-repeat domain 67 d2fug33 not modelled 6.3 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins 68 c3myxA_ not modelled 6.2 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pspto_0244; PDBTitle: crystal structure of a pspto_0244 (protein with unknown function which2 belongs to pfam duf861 family) from pseudomonas syringae pv. tomato3 str. dc3000 at 1.30 a resolution 69 d1rhya2 not modelled 6.0 12 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Imidazole glycerol phosphate dehydratase 70 c2aujD_ not modelled 5.9 26 PDB header:transferase Chain: D: PDB Molecule:dna-directed rna polymerase beta' chain; PDBTitle: structure of thermus aquaticus rna polymerase beta'-subunit2 insert 71 d1uija1 not modelled 5.7 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 72 d1uika1 not modelled 5.6 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 73 c2opkC_ not modelled 5.5 14 PDB header:isomerase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative mannose-6-phosphate isomerase2 (reut_a1446) from ralstonia eutropha jmp134 at 2.10 a resolution 74 c2d40C_ not modelled 5.5 10 PDB header:oxidoreductase Chain: C: PDB Molecule:putative gentisate 1,2-dioxygenase; PDBTitle: crystal structure of z3393 from escherichia coli o157:h7 75 d1u0la1 not modelled 5.3 30 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 76 d1i8da1 not modelled 5.1 12 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Riboflavin synthase