Job Description P0AG48 Confidence 100.00% Date Thu Jan 5 11:28:07 GMT 2012 Rank 2 Aligned Residues 102 % Identity 30% Template c3bboT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:ribosomal protein l21; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome Resolution 9.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		M	Y	A	V	F	Q	S	G	G	K	Q	H	R	V	S	E	G	Q	T	V	R	L	E	K	L	D	.	I	A	T	G	E	T	V	E	F	A	E	V	L	M	I	A	N	G	E	E	V	K	I	G	V	P	F	V	D	G	G	V	I	K	A	E	V	V	A	H	G	R	G	E	K	V	K	I	V	K	F	R	R
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		I	F	A	V	V	V	I	G	S	R	Q	Y	I	V	I	P	G	R	W	I	Y	T	Q	R	L	K	G	A	T	V	N	D	K	I	V	L	N	K	V	L	L	V	G	T	K	A	S	T	Y	I	G	T	P	I	V	T	N	A	A	V	H	A	V	V	E	E	Q	L	L	D	D	K	V	I	V	F	K	Y	K	K
Template Known Secondary structure								S	S	S							T	T									T	T	S		T	T						T	T				B		S	S	S		B			S	S	S	S		S	S														S									T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	H	Y	R	K	Q	Q	G	H	R	Q	W	F	T	D	V	K	I	T	G	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	N	Y	R	R	N	I	G	H	R	Q	P	I	T	R	I	K	I	T	G	I	T
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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