 |
Job Description | P0AG48 | Confidence | 14.63% | Date | Thu Jan 5 11:28:07 GMT 2012 |
Rank | 40 | Aligned Residues | 46 |
% Identity | 17% | Template | c2h5xA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:holliday junction atp-dependent dna helicase ruva; |
PDBTitle: ruva from mycobacterium tuberculosis
|
Resolution | 2.70 Å |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | V | F | Q | S | G | G | K | Q | H | R | V | S | E | G | Q | T | V | R | L | E | K | L | D | I | A | T | G | E | T | V | E | F | A | E | V | L | M | I | A | N | G | E | E | V | K | I | G |
Query Conservation |   |
|
|
|
|   |   |
|
|
|
|
|   |
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |
|
|
|
|   |
|   |
|   |   |   |   | . |   |   |   |
|   | . | . |   |
|   |   |
|   |
|   |
|   |   |   |
|
|
|
|   |   |   |
|
|
|
Template Sequence |   |
H | V | V | I | E | A | A | G | V | G | Y | R | V | N | A | T | P | A | T | . |
L | A | T | L | R | . |
. |
Q | G | T | E | A | R | L | I | T | A | M | I | V | R | E | D | S | M | T | L | Y | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|  |  |  | . |  |  | T |
|
| . | . | T | T | S |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|  |  |  | . |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|