Job Description P0AF52 Confidence 5.55% Date Thu Jan 5 11:25:13 GMT 2012 Rank 4 Aligned Residues 252 % Identity 8% Template c3orgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cmclc; PDBTitle: crystal structure of a eukaryotic clc transporter Resolution 3.50 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	L	R	N	L	P	H	G	V	A	H	G	T	G	I	G	I	G	L	F	L	L	L	I	A	A	N	G	V	G	L	V	I	K	N	P	L	D	G	L	P	V	A	L	G	D	F	A	T	F	P	V	I	M	S	L	V	G	L	A	V	I	I	G	L	E	K	L	K	V	P	G	G	I	L	L	T	I	I
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	L	R	L	V	C	F	L	T	L	L	G	V	T	A	A	L	F	I	F	A	V	D	L	A	V	H	G	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	M	K	I	S	R	L	A	G	R	F	A	G	Y	I	L	Y	V	V	S	G	V	A
Template Known Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		G	I	S	I	V	G	L	I	F	D	P	N	V	H	F	S	G	V	F	A	M	P	S	L	S	D	E	N	G	N	.	.	S	L	I	G	S	L	D	I	M	G	A	L	N	P	V	V	L	P	S	V	L	A	L	V	M	T	A	V	F	D	A	T	G	T	I	R	A	V	A	G	Q	A	N	L	L	D	K	D
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		L	C	L	L	S	T	F	W	C	A	V	L	S	T	E	A	E	G	S	G	L	P	Q	M	K	S	I	L	S	G	F	Y	D	K	M	R	S	A	L	E	L	R	V	L	F	A	K	A	L	G	L	I	C	A	I	G	G	G	L	P	V	G	W	E	G	P	N	V	H	I	A	C	I	I	A	H	Q	F	Y	R
Template Known Secondary structure													S		G	G	G		B		S									T	T	T					G	G	G	G	S																	T	T		S		B	S																T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
									290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.					350	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																															.																															.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																															.																															.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	Q	I	I	D	G	G	K	A	L	T	T	D	S	M	S	S	V	F	S	G	L	V	G	A	A	P	A	A	V	.	Y	I	E	S	A	A	G	T	A	A	G	G	K	T	G	L	T	A	I	T	V	G	V	L	F	L	L	I	L	F	.	.	.	.	L	S	P	L	S	Y	L	V
Query Conservation		.	.	.	.	.	.	.																															.																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.																															.																															.	.	.	.
Template Conservation
Template Sequence		L	G	V	F	K	E	L	C	T	D	R	A	L	R	L	Q	T	L	A	A	A	C	A	V	G	L	A	S	S	F	G	A	P	L	G	G	V	L	Y	S	I	E	T	I	A	S	F	Y	L	V	Q	A	F	W	K	G	V	L	S	A	L	S	G	A	I	V	Y	E	L	D	V	S	R	T	Q	T	L	L	Y	A
Template Known Secondary structure		S	T	T	T	T					S																					T													T		S	S			T	T																T	T						S		T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	Y	A	T	A	P	A	L	M	Y	V	G	L	L	M	L	S	N	V	A	K	I	D	F	A	D	F	V	D	A	M	A	G	L	V	T	A	V	F	I	V	L	T	C	N	I	V	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	G	A	L	M	G	V	L	G	A	L	F	I	R	C	V	R	S	I	Y	E	L	R	M	R	H	Y	P	G	T	N	R	Y	F	L	V	G	V	V	A	L	F	A	S	A	L	Q	Y	P
Template Known Secondary structure																											S	S	S	T	T			T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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