Job Description P0AF52 Confidence 2.89% Date Thu Jan 5 11:25:13 GMT 2012 Rank 30 Aligned Residues 29 % Identity 21% Template c3ns4A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 53; PDBTitle: structure of a c-terminal fragment of its vps53 subunit suggests2 similarity of garp to a family of tethering complexes Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		T	P	S	A	R	T	G	G	S	L	D	A	W	F	K	I	.	.	S	Q	R	G	S	T	V	R	Q	E	V	V	A
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		A	P	L	D	S	A	D	D	Y	Y	E	T	Y	S	K	L	T	N	N	N	P	D	S	A	V	W	S	F	V	L	A
Template Known Secondary structure					S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions