Job Description P0AF52 Confidence 5.17% Date Thu Jan 5 11:25:13 GMT 2012 Rank 7 Aligned Residues 197 % Identity 13% Template c2ht2B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex Resolution 3.32 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																					.																															.	.	.	.	.
Query SS confidence																					.																															.	.	.	.	.
Query Sequence		L	D	A	W	F	K	I	S	Q	R	G	S	T	V	R	Q	E	V	V	.	A	G	L	T	T	F	L	A	M	V	Y	S	V	I	V	V	P	G	M	L	G	K	A	G	F	P	P	A	A	V	.	.	.	.	.	F	V	A	T	C	L	V	A	G	L	G	S	I	V	M	G	L	W	A	N	L	P	L	A	I
Query Conservation																					.																															.	.	.	.	.
Alig confidence												.	.								.																															.	.	.	.	.
Template Conservation												.	.
Template Sequence		V	L	D	I	F	R	L	K	G	D	.	.	E	A	R	H	T	L	L	A	T	G	A	A	A	G	L	A	A	A	F	N	A	P	L	A	G	I	L	F	I	I	E	E	M	R	P	Q	F	R	Y	T	L	I	S	I	K	A	V	F	I	G	V	I	M	S	T	I	M	Y	R	I	F	N	H	E	V	A	L	I
Template Known Secondary structure						T	T			S		.	.																				T										T	T	T	T	S		S	S	S																									T	T			S
Template Predicted Secondary structure												.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		G	C	A	I	S	L	T	A	F	T	A	F	S	L	V	L	G	Q	H	I	S	V	P	V	A	L	G	A	V	F	L	M	G	V	L	F	T	V	I	S	A	T	G	I	R	S	W	I	L	R	N	L	P	H	.	.	.	.	.	.	.	.	G	V	A	H	G	T	G	I	G	I	G	L	F	L	L	L	I	A
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																													.	.													.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		D	V	G	.	.	.	.	.	.	.	.	.	K	L	S	D	A	P	L	N	T	L	W	L	Y	L	I	L	G	I	I	F	G	I	F	G	P	I	F	N	.	.	K	W	V	L	G	M	Q	D	L	L	H	R	V	H	G	G	N	I	T	K	W	V	L	M	G	G	A	I	G	G	L	C	G	L	L	G	F	V
Template Known Secondary structure					.	.	.	.	.	.	.	.	.							G	G	G																				.	.													T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		240	.	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	V	G	L	V	I	K	N	P	L	D	G	L	P	V	A	L	G	D	F	A	T	F	P	V	I	M	S	L	V	G	L	A	V	I	I	G	L	E	K	L	K	V	P	G	G	I	L	L	T	I	I	G	I	S	I	V	G	L	I	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	A	T	S	G	G	G	F	N	L	I	P	I	A	T	A	G	N	F	S	M	G	M	L	V	F	I	F	V	A	R	V	I	T	T	L	L	C	F	S	S	G	A	P	G	G	I	F	A	P	M	L	A	L	G	T	V	L	G	T	A	F	G
Template Known Secondary structure			G	G	G	S	S		S	T	T							T	T		S																						T	T		S	S	B	S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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