Job Description P76223 Confidence 99.95% Date Thu Jan 5 12:20:50 GMT 2012 Rank 63 Aligned Residues 298 % Identity 8% Template d2onsa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.55

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																														.																																							.
Query SS confidence																														.																																							.
Query Sequence		T	V	W	F	N	A	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	.	A	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	.	N	G	E	N	F	R	T	L	K	E	A	N
Query Conservation																														.																																							.
Alig confidence													.	.	.															.											.									.	.	.						.	.	.	.								.
Template Conservation													.	.	.																										.									.	.	.						.	.	.	.
Template Sequence		K	L	K	V	F	H	A	G	S	L	T	.	.	.	E	P	M	K	A	F	K	R	A	F	E	E	K	H	P	N	V	E	V	Q	T	E	A	A	G	.	S	A	A	T	I	R	K	V	.	.	.	T	E	L	G	R	.	.	.	.	K	A	D	V	I	A	T	A	D	Y	T	L	I	Q	K	M	M	Y	P	E
Template Known Secondary structure									G	G	G		.	.	.															T	T										.									.	.	.		T	S			.	.	.	.			S					S	S									T	T	T
Template Predicted Secondary structure													.	.	.																										.									.	.	.						.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.				.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	T	G	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	Q	P	P	Q	T	P	Q	A	L	L	E	F	A	K	A	N	P	G	T	V	T	Y	P	R	P	P	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	N	W	T	I	M	F	A	K	N	Q	I	V	L	A	Y	R	N	D	S	R	Y	A	D	E	I	N	S	Q	N	W	Y	E	I	L	K	R	P	D	V	R	F	G	F	S	N	P	N	D	D	P	C	G	Y	R	S	L	M	A	I	Q	L	A	E	L	Y	Y	N	D	P	T	I	F	D	E	L	V	A	K
Template Known Secondary structure		T		S																T	T	S	T	T	T	T	T			T	T	T						T	S	T	T								T	T	T																		T	T		T	T						T	G	G
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	T	A	F	L	E	Q	L	L	I	M	L	T	P	D	P	A	A	L	K	E	A	P	D	D	A	T	F	A	R	V	T	A	P	L	W	Q	Y	L	D	V	L	H	P	Y	L	W	R	E	G	K	D	F	P	P	S	P	A	R	M	D	A	L	L	K	A	G	T	L	R	L	S	L	T	F	N	P	A	H
Query Conservation
Alig confidence																																																								.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		N	S	N	L	R	F	S	E	D	N	G	S	Y	V	L	R	M	P	S	S	E	R	I	E	I	N	K	S	K	I	M	I	R	S	M	E	M	E	L	I	H	L	V	E	S	G	E	L	D	Y	F	F	I	Y	.	.	.	.	.	.	K	S	V	A	K	Q	H	G	F	N	F	V	E	L	P	V	E	I	D	L
Template Known Secondary structure		G	B	S							T	T									G	G	G			B		T	T	T					S	S	G	G	G								T	S		S						.	.	.	.	.	.							T	T								T	T	T	S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		A	Q	Q	K	I	A	S	G	D	L	P	A	S	S	Y	S	F	G	F	R	E	G	.	M	I	G	N	V	H	F	V	T	I	P	A	N	A	N	A	S	A	A	A	K	V	V	A	N	F	L	L	S	P	D	A	Q	L	R	K	A	D	P	A	V	W	G	D	P	S	V	L	D	P	Q	K	L	P	D
Query Conservation																								.
Alig confidence																								.
Template Conservation
Template Sequence		S	S	P	D	Y	A	E	L	Y	S	K	V	K	V	V	L	A	N	G	K	E	V	T	G	K	P	I	V	Y	G	I	T	I	P	K	N	A	E	N	R	E	L	A	V	E	F	V	K	L	V	I	S	E	E	G	Q	E	I	L	R	E	L	G	Q	E	P	L	V	P	P	R	A	D	T	A	V	P	S
Template Known Secondary structure				G	G	G					T	T						T	T	S																T	T		T	T													S										T	T										S	S			G	G
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions