Job Description P76223 Confidence 99.82% Date Thu Jan 5 12:20:50 GMT 2012 Rank 71 Aligned Residues 287 % Identity 15% Template d1sbpa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																																								.
Query SS confidence																																	.	.	.	.																																								.
Query Sequence		K	G	Q	T	V	W	F	N	A	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	.	.	.	.	A	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	.	G	E	N	F	R
Query Conservation																																	.	.	.	.																																								.
Alig confidence																	.	.	.														.	.	.	.														.	.	.												.	.	.	.									.
Template Conservation																	.	.	.																															.	.	.												.	.	.	.
Template Sequence		K	D	I	Q	L	L	N	V	S	Y	D	P	T	R	E	.	.	.	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	E	T	G	D	N	V	V	I	D	Q	S	H	G	G	S	.	.	.	G	K	Q	A	T	S	V	I	N	G	I	.	.	.	.	E	A	D	T	V	T	L	A	L	A	Y	D	V	N
Template Known Secondary structure												S	T	T			.	.	.																		S										S			.	.	.									T	T		.	.	.	.			S					S	S
Template Predicted Secondary structure																	.	.	.																															.	.	.												.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	E	A	N	L	L	Q	T	G	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	Q	P	P	Q	T	P	Q	A	L	L	E	F	A	K	A	N	P	G	T	V	T	Y
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.
Template Sequence		A	I	A	E	R	G	R	I	D	K	N	W	I	K	R	L	P	D	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	.	N	P	K	Q	I	H	D	W	N	D	L	.	.	I	K	P	G	V	S	V	I	T	P	N
Template Known Secondary structure						T	T	S	S		T	T	G	G	G	G	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S			B								T	T	.		T	T				S	G	G	G	G	.	.	G	S	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																						.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	P	P	D	F	T	G	T	A	F	L	E	Q	L	L	I	M	L	T	P	D	P	A	A	L	K	E	A	P	D	D	A	T	F	A	R	V	T	A	P	L	W	Q	Y	L	D	V	L	H	P	Y	L	W	R	E	G	K	D	F	P	P	S	P	A	R	M	D	A	L	L	K	A	G	T	L	R	L	S	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	D	Q	A	K	A	E	D	F	V	K	A	L	F	K	N	V	E	.	.	.	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I
Template Known Secondary structure		T	T	T																			T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T															T			.	.	.				S	S										T	S				S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.														.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		T	F	N	P	A	H	A	Q	Q	K	I	A	S	G	D	L	P	A	S	S	Y	S	F	G	F	R	E	G	M	I	G	N	V	H	F	V	T	I	P	.	.	.	.	A	N	A	N	A	S	A	A	A	K	V	V	A	N	F	L	L	S	P	D	A	Q	L	R	K	A	D	P	A	V	W	G	D	P	S	V	L
Query Conservation																																									.	.	.	.
Alig confidence																	.	.	.																						.	.	.	.																																	.	.	.	.	.
Template Conservation																	.	.	.																																																										.	.	.	.	.
Template Sequence		A	W	E	N	E	A	L	L	A	T	N	E	L	G	K	.	.	.	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	D	T	K	A	V	A	E	A	Y	L	K	Y	L	Y	S	P	E	G	Q	E	I	A	A	K	N	F	Y	R	P	.	.	.	.	.
Template Known Secondary structure													T	T	T	T	.	.	.	T	T							S					B															T											G	G	G	S										T	T				.	.	.	.	.
Template Predicted Secondary structure																	.	.	.																																																										.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Q	K	L	P	D	G	Q	R	E	S	L	Q	S	R	M	P	Q	D	L	P	P	V	L	A	E	P	H	A	G	W	V	N	A	L	E	Q
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	R	D	A	D	V	A	K	K	Y	D	D	A	F	P	K	L	K	L	F	T	I	D	E	V	F	G	G	W	A	K	A	Q	K	D
Template Known Secondary structure		.	.	.	.	S								T	G	G	G	S													S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions