Job Description P76223 Confidence 96.09% Date Thu Jan 5 12:20:50 GMT 2012 Rank 80 Aligned Residues 260 % Identity 15% Template d1ixha_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 0.98

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	A	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	G	E	N	F	R	T	L	K	E	A	N	L	L	Q	T	G	W	A	E	T
Query Conservation
Alig confidence																																	.											.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.											.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	A	T	F	P	A	P	V	Y	A	K	W	A	D	T	Y	Q	K	E	T	G	N	K	V	N	Y	Q	G	I	G	.	S	S	G	G	V	K	Q	I	I	A	.	.	.	.	.	.	.	.	.	N	T	V	D	F	G	A	S	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	S	D	E	K
Template Known Secondary structure					S	T	T																										.										T	.	.	.	.	.	.	.	.	.	T		S	S					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.											.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.	.	.														.	.	60	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	V	T	P	Q	P	P	Q	T	P	Q	A	L	L	E	F	A	K	A	N	P	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	F	Q	F	P	T	V	I	G	G	V	V	L	A	V	N	I	P	G	L	K	S	G	E	L	V	L	D	G	K	T	L	G	D	I	Y	L	G	K	I	K	K	W	D	D	E	A	I	A	K	L	N	P	G	L	K	L	P
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																		T	T			T	T														T	T				B	T	T									T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.																		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
			181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	T	V	T	Y	P	R	P	P	D	F	T	G	T	A	F	L	E	Q	L	L	I	M	L	T	P	D	P	A	A	L	K	E	A	P	D	D	A	T	F	A	R	V	T	A	P	L	W	Q	Y	L	D	V	L	H	P	Y	L	W	R	E	G	K	D	F	P	P	S	P	A	R	M	D	A	L	L	K	A	G
Query Conservation		.
Alig confidence		.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	N	I	A	V	V	R	R	A	D	G	S	G	T	S	F	V	F	T	S	Y	L	A	K	V	N	E	E	W	K	N	N	V	G	T	G	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	W	P	I	G	L	G	G	K	G	N	D	G	I	A	A	F	V	Q	R	L
Template Known Secondary structure				B							S	S																							T				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S					S												S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.																														.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	R	L	S	L	T	F	N	P	A	H	A	Q	Q	K	I	A	S	G	D	L	P	A	S	S	Y	S	F	G	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	M	I	G	N	V	H	F	V	T	I	P	A	N	A	N	A	S
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	A	I	G	Y	V	E	Y	A	Y	A	K	Q	N	N	L	A	Y	T	K	L	I	S	A	D	G	K	P	V	S	P	T	E	E	N	F	A	N	A	A	K	G	A	D	W	S	K	T	F	A	Q	D	L	T	N	Q	K	G	E	D	A	W	P	I	T	S	T	T	F	I	L	I	H	K	D	Q	K	K	P
Template Known Secondary structure		T	T												T	T	T									T	T	S														T	T	T			T	T	T		S					B	S			S	T	T			S	B										S	B		S	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		311				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		A	.	.	.	A	A	K	V	V	A	N	F	L	L	S	P	D	A	Q	L	R	K	A	D	P	A	V	W	G	D	P	S	V	L	D	P	Q	K	L	P	D	G	Q	R	E	S	L	Q	S	R	M	P	Q	D	L	P	P	V	L	A	E	P
Query Conservation			.	.	.
Alig confidence			.	.	.												.														.	.	.	.	.	.	.	.	.
Template Conservation																	.														.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	G	T	E	V	L	K	F	F	D	W	A	Y	K	.	T	G	A	K	Q	A	N	D	L	D	Y	A	S	.	.	.	.	.	.	.	.	.	L	P	D	S	V	V	E	Q	V	R	A	A	W	K	T	N	I	K	D	S	S	G	K	P
Template Known Secondary structure																	.									T	T				.	.	.	.	.	.	.	.	.																		B		T	T	S		B
Template Predicted Secondary structure																	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.										.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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