Job Description P76223 Confidence 100.00% Date Thu Jan 5 12:20:50 GMT 2012 Rank 21 Aligned Residues 344 % Identity 10% Template d1elja_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	K	G	Q	T	V	W	F	N	A	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	A	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	G	E	N	F	R	T	L	K
Query Conservation
Alig confidence														.																															.	.	.															.	.	.	.
Template Conservation														.																															.	.	.															.	.	.	.
Template Sequence		K	I	E	E	G	K	V	V	I	W	H	A	.	M	Q	P	N	E	L	E	V	F	Q	S	L	A	E	E	Y	M	A	L	P	E	V	E	I	V	F	E	Q	K	P	.	.	.	N	L	E	D	A	L	K	A	A	I	P	T	G	Q	.	.	.	.	G	P	D	L	F	I	W	A	H	D	W	I	G	K	F	A
Template Known Secondary structure														.																														T	.	.	.	T									T	T	T	T		.	.	.	.	S		S						G	G	G
Template Predicted Secondary structure														.																															.	.	.															.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	N	L	L	Q	T	G	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	Q	P	P	Q	T	P	Q	A	L	L	E	F	A	K	A	N	P	G	T	V	T	Y	P	R	P
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		E	A	G	L	L	E	P	I	D	.	E	Y	V	T	E	D	L	L	N	E	F	A	P	M	A	Q	D	A	M	Q	Y	K	G	H	Y	Y	A	L	P	F	A	A	E	T	V	A	I	I	Y	N	K	E	M	V	S	E	P	P	K	T	F	D	E	M	K	A	I	M	E	K	Y	Y	D	P	A	N	E	K	Y	G
Template Known Secondary structure			T	T		B				T	.	T	T							T	T	B								T			T	T																		T	T	T		S	S			S	S													B	G	G	G	T	B		S
Template Predicted Secondary structure											.
Template SS confidence
		75	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	F	T	G	T	A	F	L	E	Q	L	L	I	M	L	T	P	D	P	A	A	L	K	E	A	P	D	D	A	T	F	A	R	V	T	A	P	L	W	Q	Y	L	D	V	L	H	P	Y	L	W	R	E	G	K	D	F	P	P	S	P	A	R	M	D	A	L	L	K	A	G	T	L	R	L	S	L	T	F	N
Query Conservation
Alig confidence																																																				.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		I	A	W	P	I	N	A	Y	F	I	S	A	I	A	Q	A	F	G	G	Y	Y	F	D	D	K	T	E	Q	P	G	L	D	K	P	E	T	I	E	G	F	K	F	F	F	T	E	I	W	P	Y	.	.	.	.	M	A	P	T	G	D	Y	N	T	Q	Q	S	I	F	L	E	G	R	A	P	M	M	V	N	G	P
Template Known Secondary structure			B				S									T	T	T	S			S			T	T	T	T				T	T	S														T	G	G	G	.	.	.	.	S		S													T	T	S	S	S						G
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.							.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		P	A	H	A	Q	Q	K	I	A	S	G	D	L	P	A	S	S	Y	S	F	G	F	R	E	G	.	.	.	.	.	.	M	I	G	N	V	H	F	V	T	I	P	A	N	A	N	A	S	A	A	A	K	V	V	A	N	F	L	L	S	P	D	A	Q	L	R	K	A	D	P	A	V	W	G	D	P	S	V	L	D
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.
Template Conservation
Template Sequence		W	S	I	N	D	V	K	K	A	G	I	N	F	G	V	V	P	L	P	P	I	I	K	D	G	K	E	Y	W	P	R	P	Y	G	G	V	K	L	I	Y	F	A	A	G	I	K	N	K	D	A	A	W	K	F	A	K	W	L	T	T	S	E	E	S	I	K	T	L	A	L	E	L	G	Y	I	P	V	L	T	K
Template Known Secondary structure		G	G							T	T														T	T																	B	T	T		S																													B			B	G	G
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	K	L	P	D	G	Q	R	E	S	L	Q	S	R	M	P	Q	D	L	P	P	V	L	A	E	P	H	A	G	W	V	N	A	L	E	Q	E	W	L	H	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	D	D	P	E	I	K	N	D	P	V	I	Y	G	F	G	Q	A	V	Q	H	A	Y	L	M	P	K	S	P	K	M	S	A	V	W	G	G	V	D	G	A	I
Template Known Secondary structure		G	G	G						T													T								T	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions