Job Description P76223 Confidence 100.00% Date Thu Jan 5 12:20:50 GMT 2012 Rank 32 Aligned Residues 321 % Identity 14% Template c3rpwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter; PDBTitle: the crystal structure of an abc transporter from rhodopseudomonas2 palustris cga009 Resolution 1.65 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	Q	T	V	W	F	N	A	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	A	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	G	E	N	F	R	T	L	K	E	A
Query Conservation
Alig confidence																		.																											.	.	.													.	.	.										.
Template Conservation																		.																											.	.	.													.	.	.										.
Template Sequence		Q	S	N	V	V	I	X	Q	D	P	G	G	G	Y	G	D	.	A	L	R	K	V	X	Y	D	P	F	E	K	E	T	G	I	K	V	V	T	V	Q	E	A	R	S	.	.	.	G	P	R	I	K	A	Q	A	E	A	G	K	.	.	.	A	Q	W	D	L	T	F	I	F	.	D	Q	E	T	K	L	L	G	D
Template Known Secondary structure				S														.						T									S									S			.	.	.											T		.	.	.				S	B					.							T
Template Predicted Secondary structure																		.																											.	.	.													.	.	.										.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		N	L	L	Q	T	G	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	.	.	Q	P	P	Q	T	P	Q	A	L	L	E	F	A	K	A	N	P	G	T	V	T	Y	P	R	P
Query Conservation																																																							.	.
Alig confidence																	.	.	.	.																																			.	.
Template Conservation																	.	.	.	.
Template Sequence		C	C	L	A	D	I	D	Y	S	K	L	S	E	S	A	.	.	.	.	H	K	T	L	A	A	X	P	D	N	L	K	R	K	K	G	V	A	L	Q	V	I	G	V	G	L	V	Y	N	K	D	K	F	K	G	D	K	A	P	Q	T	W	A	D	F	W	D	V	K	K	F	P	G	R	R	C	X	P	A	W	P
Template Known Secondary structure				B					G	G	G	S					.	.	.	.						T	S		G	G	G			T	T															T	T	T	S		T	T	S	S			S							T	T	T	S		S						S	S	S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	F	T	G	T	A	F	L	E	Q	L	L	I	M	L	T	P	D	P	A	A	L	K	E	A	P	D	D	A	T	F	A	R	V	T	A	P	L	W	Q	Y	L	D	V	L	H	P	Y	L	W	R	E	G	K	D	F	P	P	S	P	A	R	M	D	A	L	L	K	A	G	T	L	R	L	S	L	T	F	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Sequence		R	F	T	F	E	A	A	L	X	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	K	D	K	L	Y	P	I	D	X	D	R	A	L	K	K	L	K	E	I	K	P	H	V	.	.	.	.	V	K	W	W	T	T	A	A	Q	P	P	Q	L	I	L	D	G	E	A	D	X	C	L	A	Y	T
Template Known Secondary structure		T	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S			S														G	G	G		.	.	.	.						S	T	T								T	T	S		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.														.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	H	A	Q	Q	K	I	A	S	G	D	L	P	A	S	S	Y	S	F	G	F	R	E	G	M	I	G	N	V	H	F	V	T	I	P	A	N	A	N	A	S	A	A	A	K	V	V	A	N	F	L	L	S	P	D	A	Q	L	R	K	A	D	P	A	V	W	G	D	P	S	V	L	D	P	Q	K	L	P	D
Query Conservation
Alig confidence																.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		G	S	X	S	K	L	A	L	E	G	A	P	I	D	.	.	.	.	.	.	L	T	F	N	Q	G	F	V	Y	Y	D	F	F	S	I	P	K	G	A	P	N	Y	D	N	A	L	K	L	L	S	W	R	L	D	P	K	R	A	A	Q	L	T	S	T	F	P	V	A	L	P	S	K	V	V	F	D	A	A	T	D
Template Known Secondary structure											T		S			.	.	.	.	.	.																B	T	T		T	T												T												S			B		S									S
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.								.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		G	Q	R	E	S	L	Q	S	R	M	P	Q	D	L	P	P	V	L	A	E	P	H	A	G	W	V	.	.	.	.	.	.	.	N	A	L	E	Q	E	W	L	H	R	Y	G
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	I	A	R	Y	W	A	N	N	P	E	N	V	A	K	A	I	E	W	S	P	D	F	W	G	A	P	S	P	A	G	N	S	T	N	E	E	Y	G	Q	E	K	L	N
Template Known Secondary structure		G	G	G	G	G	G	S	T	T	S							S										S	B		T	T	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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