Job Description P76223 Confidence 100.00% Date Thu Jan 5 12:20:50 GMT 2012 Rank 22 Aligned Residues 344 % Identity 9% Template c3k02A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:acarbose/maltose binding protein gach; PDBTitle: crystal structures of the gach receptor of streptomyces glaucescens2 gla.o in the unliganded form and in complex with acarbose and an3 acarbose homolog. comparison with acarbose-loaded maltose binding4 protein of salmonella typhimurium. Resolution 1.55 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		Q	T	V	W	F	N	A	W	G	G	D	T	A	I	N	R	Y	L	D	W	V	S	G	E	M	K	T	H	Y	.	A	I	N	L	K	I	V	R	L	A	D	A	A	D	A	V	K	R	I	Q	T	E	A	A	A	G	R	K	T	G	G	S	V	D	L	L	W	V	N	G	E	N	F	R	T	L	K	E	A	N
Query Conservation																															.
Alig confidence																.															.											.																	.	.	.
Template Conservation																.																										.																	.	.	.
Template Sequence		G	T	V	T	F	W	D	T	S	N	E	A	E	K	.	A	T	Y	Q	A	L	A	E	G	F	E	K	E	H	P	K	V	D	V	K	Y	V	N	V	P	.	F	G	E	A	N	A	K	F	K	N	A	A	G	G	N	S	.	.	.	G	A	P	D	V	M	R	T	E	V	A	W	V	A	D	F	A	S	I	G
Template Known Secondary structure												T	T	T		.															T	T										.														T	T	S	.	.	.	S			S						T	T								T	T
Template Predicted Secondary structure																.																										.																	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		L	L	Q	T	G	W	A	E	T	L	P	N	W	R	Y	V	D	T	Q	L	P	V	R	E	D	F	S	V	P	T	Q	G	A	E	S	P	W	G	G	A	Q	L	T	F	I	A	R	R	D	V	T	P	.	.	.	.	Q	P	P	Q	T	P	Q	A	L	L	E	F	A	K	A	N	P	G	T	V	T	Y	P	R
Query Conservation																																																						.	.	.	.
Alig confidence														.																																								.	.	.	.
Template Conservation														.
Template Sequence		Y	L	A	P	L	D	G	T	P	A	L	D	.	D	G	S	D	H	L	P	Q	A	A	A	S	T	R	Y	E	G	K	T	Y	A	V	P	Q	V	I	D	T	L	A	L	F	Y	N	K	E	L	L	T	K	A	G	V	E	V	P	G	S	V	A	E	L	K	T	A	A	A	E	I	T	E	K	T	G	A	T	G
Template Known Secondary structure			B				T	T	S	T	T		S	.	S	G	G	G	B							T	T			T	T																									T					S	B																S
Template Predicted Secondary structure														.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	D	F	T	G	T	A	F	L	E	Q	L	L	I	M	L	T	P	D	P	A	A	L	K	E	A	P	D	D	A	T	F	A	R	V	T	A	P	L	W	Q	Y	L	D	V	L	H	P	Y	L	W	R	E	G	K	D	F	P	P	S	P	A	R	M	D	A	L	L	K	A	G	T	L	R	L	S	L	T	F
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		L	Y	L	R	G	D	D	P	Y	W	F	L	P	Y	L	Y	G	E	G	G	D	L	V	D	E	K	N	K	T	V	T	V	D	D	E	A	G	V	R	A	Y	R	V	I	K	D	L	V	D	S	K	A	A	I	T	D	A	.	S	D	G	W	N	N	M	Q	N	A	F	K	S	G	K	V	A	M	M	V	N	G
Template Known Secondary structure							S		G	G	G	G							T	T			S			T	T	T	T				T	T	S																T	T	S					S	.	S												T	T	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.							.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		N	P	A	H	A	Q	Q	K	I	A	S	G	D	L	P	A	S	S	Y	S	F	G	F	R	E	G	.	.	.	.	.	.	M	I	G	N	V	H	F	V	T	I	P	A	N	A	N	A	S	A	A	A	K	V	V	A	N	F	L	L	S	P	D	A	Q	L	R	K	A	D	P	A	V	W	G	D	P	S	V	L
Query Conservation																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.
Template Conservation
Template Sequence		P	W	A	I	E	D	V	K	A	G	A	R	F	K	D	A	G	N	L	G	V	A	P	V	P	A	G	S	A	G	Q	G	S	P	Q	G	G	W	N	L	S	V	Y	A	G	S	K	N	L	D	A	S	Y	A	F	V	K	Y	M	S	S	A	K	V	Q	Q	Q	T	T	E	K	L	S	L	L	P	T	R	T	S
Template Known Secondary structure		G	G	G						T	S	G	G	G	S	S	G	G	G								B		S	S					B									B	T	T		S													T	S																S	B	G	G
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
					342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	P	Q	K	L	P	D	G	Q	R	E	S	L	Q	S	R	M	P	Q	D	L	P	P	V	L	A	E	P	H	A	G	W	V	N	A	L	E	Q	E	W	L	H
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		V	Y	E	V	P	S	V	A	D	N	E	M	V	K	F	F	K	P	A	V	D	K	A	V	E	R	P	W	I	A	E	G	N	A	L	F	E	P	I	R	L	Q	M	A	N
Template Known Secondary structure		G	G	G	S					T															B						T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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